Surrogates v7.0.1

Diff since v7.0.0

Merged pull requests:

• build(docs): update compat for Surrogates (#521) (@sathvikbhagavan)
• build: increment patch version (#522) (@sathvikbhagavan)

Closed issues:

• SurrogatesFlux fails to precompile (#514)

Surrogates v7.0.0

Diff since v6.11.0

Breaking changes

• Sublibraries were turned into extensions. I.e. using SurrogatesSVM now just needs using Surrogates, SVM.

Merged pull requests:

• Add an optional regularization parameter to RadialBasis, preventing SingularValueException. (#512) (@spalato)
• Fixes for 1D NeuralSurrogate optimisation (#516) (@mjowen)
• refactor: make lib/* into extensions (#517) (@sathvikbhagavan)
• Add spell checking configuration (#518) (@ChrisRackauckas)
• Format code with JuliaFormatter v2.1.5 (#519) (@ChrisRackauckas)

Closed issues:

• Can things in lib/ go in package extensions now? (#513)
• surrogate_optimize! errors on 1D NeuralSurrogate (#515)

Surrogates v6.11.0

Diff since v6.10.0

Merged pull requests:

• docs: add Zenodo DOI (#486) (@sathvikbhagavan)
• build(deps): bump crate-ci/typos from 1.22.7 to 1.23.1 (#487) (@dependabot[bot])
• refactor: use SurrogatesBase in SurrogatesAbstractGPs (#489) (@sathvikbhagavan)
• ci: standardize workflows using SciML's reusable workflows (#491) (@thazhemadam)
• build(deps): bump crate-ci/typos from 1.23.1 to 1.24.1 (#492) (@dependabot[bot])
• build(deps): bump crate-ci/typos from 1.24.1 to 1.25.0 (#493) (@dependabot[bot])
• build(deps): bump crate-ci/typos from 1.25.0 to 1.26.0 (#494) (@dependabot[bot])
• [skip ci] reduce dependabot typos updates (#495) (@ArnoStrouwen)
• ci: test with 1, lts and pre versions of julia (#496) (@thazhemadam)
• build(deps): bump codecov/codecov-action from 4 to 5 (#497) (@dependabot[bot])
• CompatHelper: bump compat for Flux to 0.15 for package docs, (keep existing compat) (#498) (@github-actions[bot])
• CompatHelper: bump compat for Flux to 0.15 for package SurrogatesFlux, (keep existing compat) (#499) (@github-actions[bot])
• CompatHelper: bump compat for Flux to 0.16 for package docs, (keep existing compat) (#500) (@github-actions[bot])
• CompatHelper: bump compat for Flux to 0.16 for package SurrogatesFlux, (keep existing compat) (#501) (@github-actions[bot])
• CompatHelper: bump compat for Zygote to 0.7, (keep existing compat) (#502) (@github-actions[bot])
• CompatHelper: bump compat for Zygote to 0.7 for package docs, (keep existing compat) (#503) (@github-actions[bot])
• Fix definition of gramacy lee function (#506) (@mfschubert)
• refactor: use SurrogatesBase for all surrogates (#507) (@sathvikbhagavan)
• test: revive RTEA optimization tests (#508) (@sathvikbhagavan)
• docs: clean up tutorials (#509) (@sathvikbhagavan)
• CompatHelper: add new compat entry for Surrogates at version 6 for package docs, (keep existing compat) (#510) (@github-actions[bot])
• refactor: add ! in surrogate_optimize as it is mutating (#511) (@sathvikbhagavan)

Closed issues:

• Re-enable LIBSVM tests when it stops having issues (#104)
• Docs: examples for each surrogate (#152)
• Proposal: separate surrogate settings from x, y points (#238)
• Plans for parallel optimization (#278)
• Docs for NeuralSurrogate (#305)
• Flux not in dependencies warning (#308)
• Optimization function mutates surrogate struct (#380)
• Updating Surrogates to use SurrogatesBase (#488)
• Possible bug in Surrogates.jl RTEA (#504)
• Cannot reproduce https://docs.sciml.ai/Surrogates/stable/tutorials/#Example-of-NeuralSurrogate (#505)

Surrogates v6.10.0

Diff since v6.9.0

Merged pull requests:

• fix deprecation warning (#462) (@ArnoStrouwen)
• refactor: add points in DYCORS irrespective of best or not (#463) (@sathvikbhagavan)
• build(deps): bump crate-ci/typos from 1.16.23 to 1.17.0 (#465) (@dependabot[bot])
• refactor: use train data if test data is empty for a cluster (#466) (@sathvikbhagavan)
• build(deps): bump actions/cache from 3 to 4 (#467) (@dependabot[bot])
• build(deps): bump codecov/codecov-action from 3 to 4 (#468) (@dependabot[bot])
• build(deps): bump crate-ci/typos from 1.17.0 to 1.18.0 (#469) (@dependabot[bot])
• ci: explicitly specify token for codecov (#470) (@thazhemadam)
• ci: explicitly specify token for codecov (#471) (@thazhemadam)
• [skip ci] update downgrade CI repo (#472) (@ArnoStrouwen)
• reapply formatter (#473) (@ArnoStrouwen)
• refactor(SurrogatesSVM): use SurrogatesBase and cleanup code (#475) (@sathvikbhagavan)
• build(deps): bump crate-ci/typos from 1.18.0 to 1.19.0 (#476) (@dependabot[bot])
• refactor: SurrogatesRandomForest with SurrogatesBase (#477) (@sathvikbhagavan)
• build(deps): bump julia-actions/setup-julia from 1 to 2 (#480) (@dependabot[bot])
• build(deps): bump crate-ci/typos from 1.19.0 to 1.20.4 (#481) (@dependabot[bot])
• build(deps): bump crate-ci/typos from 1.20.4 to 1.21.0 (#483) (@dependabot[bot])
• build(deps): bump crate-ci/typos from 1.21.0 to 1.22.7 (#485) (@dependabot[bot])

Closed issues:

• Surrogate model is only updated when point is optimal (#461)

Surrogates v6.9.0

Diff since v6.8.0

Merged pull requests:

• Update Branin Function (#449) (@Spinachboul)
• docs: fix improved branin benchmark and run this example while building (#453) (@sathvikbhagavan)
• More CI (#458) (@ArnoStrouwen)
• LanguageTool (#459) (@ArnoStrouwen)
• Few cleanups related to julia version, compats and tests of SurrogatesMOE (#460) (@sathvikbhagavan)

Surrogates v6.8.0

Diff since v6.7.0

Merged pull requests:

• Update makedocs syntax and few cleanups (#452) (@sathvikbhagavan)

Surrogates v6.7.0

Diff since v6.6.0

Merged pull requests:

• Update wendland.md (#406) (@pnovoa)
• Fix equation formatting in the manual (#432) (@mortenpi)
• CompatHelper: bump compat for Documenter to 1 for package docs, (keep existing compat) (#440) (@github-actions[bot])
• Use XGBoost 2 (#443) (@sathvikbhagavan)
• remove Clustering from SurrogatesMOE as it is not used (#444) (@sathvikbhagavan)
• CompatHelper: add new compat entry for Statistics at version 1, (keep existing compat) (#445) (@github-actions[bot])
• Bump QMC to 0.3 and fix tests (#446) (@ashutosh-b-b)
• Fix equations displaying in benchmarks (#447) (@ErikQQY)
• typos CI (#450) (@ArnoStrouwen)
• Bump actions/checkout from 3 to 4 (#451) (@dependabot[bot])

Surrogates v6.6.0

Diff since v6.5.1

Merged pull requests:

• added reproducibility to index.md and make.jl (#413) (@00krishna)
• doc compat (#414) (@ArnoStrouwen)
• lib cov (#418) (@ArnoStrouwen)
• temp fix lib cov (#419) (@ArnoStrouwen)
• enable dependabot for GitHub actions (#427) (@ranocha)
• Bump actions/checkout from 1 to 3 (#428) (@dependabot[bot])
• Bump actions/cache from 1 to 3 (#429) (@dependabot[bot])
• Sampling functions list changed to QuasiMonteCarlo reference (#431) (@MartinuzziFrancesco)
• Documenting mathematical model of RadialBasis (#433) (@rkube)
• Parallel Surrogate Models Through Ask-tell Interface (#435) (@dreycenfoiles)
• CompatHelper: bump compat for Flux to 0.14 for package docs, (keep existing compat) (#436) (@github-actions[bot])
• CompatHelper: bump compat for Flux to 0.14 for package SurrogatesFlux, (keep existing compat) (#437) (@github-actions[bot])
• fix: master branch is failing precompilation (#438) (@sathvikbhagavan)
• Bump actions/checkout from 3 to 4 (#439) (@dependabot[bot])
• Investigate test failures (#441) (@sathvikbhagavan)

Closed issues:

• About additional data acquisition in optimization method for surrogates (#421)
• Surrogates Documentation Link Unavailable (#422)

Surrogates v6.5.1

Diff since v6.5.0

Merged pull requests:

• updated README and make.jl as per sciml template (#410) (@00krishna)
• canonize docs (#411) (@ArnoStrouwen)
• add logo (#412) (@ArnoStrouwen)

Surrogates v6.5.0

Diff since v6.4.0

Closed issues:

• Register (#404)

Merged pull requests:

• Remove unnecessary doc bits after unification (#390) (@ArnoStrouwen)
• Rewrite MOE algo (#394) (@vikram-s-narayan)
• [skip ci] badges (#397) (@ArnoStrouwen)
• doc cov (#398) (@ArnoStrouwen)
• Add Invalidations.yml [skip ci] [skip tests] (#401) (@devmotion)
• add compat for Distributions.jl (#405) (@vikram-s-narayan)
• Update SurrogatesMOE docs (#407) (@vikram-s-narayan)
• only fill upper part of radial basis matrix as it is symmetric (#409) (@kylebeggs)