Remove singletons from Nuclei engine (continuation of #6210)

[hdm]

Proposed changes

This is an extension of @Mzack9999's PR at #6210

Additional changes include:

• A single gologger instance is now passed into the Engine and then to each sub-component versus using a global gologger function
• The executorOptions is now passed by ptr and not value to avoid various race conditions
• Various race conditions were fixed in the new executionId-based global lookups
• The template.Parse function now reuses compiled templates across engine executions by patching in the ExecutionID

Closes #5239

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• I have added tests that prove my fix is effective or that my feature works
• have added necessary documentation (if appropriate)

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[Mzack9999]

List of follow-up fixes:

• Speed control is broken (example SDK at github.com/projectdiscovery/nuclei/examples/with_speed_control is currently commented out)
• Fix centralized singleton protocolstate.LfaAllowed used by global js file library
• Template validations fail locally (requires php) -> [BUG] Missing engine in templates validation should trigger a WARNING not a FATAL error #6303

Must Fix before merge:

• Fix make test
• Cached code|headless templates have nil ExecuterOptions if -code or -headless are not enabled
• Some integration tests get less results than expected for cached templates
• Investigate performance degradation (too much locking mechanism?)

Linked issues:

• Closes [BUG] NucleiEngine.Close() closes global state of protocolstate which breaks other (current and new) engines #5821

[Ice3man543]

lgtm!!

[hdm]

Thanks for the review and fixes!