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    10 repositories

    • slidetap

      Public
      Pathology data extraction and curation
      Python
      •
      Apache License 2.0
      •0•9•8•0•Updated Sep 18, 2025Sep 18, 2025

    • bigpicture-metaflex

      Public
      Metadata schemas.
      Apache License 2.0
      •0•9•0•0•Updated Sep 18, 2025Sep 18, 2025

    • wsidicom

      Public
      Python package for reading DICOM WSI file sets.
      annotationsdicomdigital-pathologywhole-slide-image
      Python
      •
      Apache License 2.0
      •9•45•1•1•Updated Sep 4, 2025Sep 4, 2025

    • opentile

      Public
      Python library for reading tiles from wsi tiff-files.
      tiffdigital-pathologywhole-slide-image
      Python
      •
      Apache License 2.0
      •4•16•0•0•Updated Aug 27, 2025Aug 27, 2025

    • wsidicomizer

      Public
      Python library for converting WSI files to DICOM
      Python
      •
      Apache License 2.0
      •13•78•15•0•Updated Aug 27, 2025Aug 27, 2025

    • bigpicture-flexplorer

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Aug 12, 2025Aug 12, 2025

    • bigpicture-msmdad

      Public
      Metadata schema definitions for directly accessible dataset submissions under the Bigpicture initiative
      Apache License 2.0
      •1•1•0•0•Updated Jul 1, 2025Jul 1, 2025

    • tissue-segmentation

      Public
      A tissue-background segmentation for whole-slide images
      Python
      •
      MIT License
      •0•0•0•0•Updated Jan 24, 2025Jan 24, 2025

    • lightstream

      Public
      A Pytorch Lightning implementation for streaming convolutional networks
      Jupyter Notebook
      •
      Apache License 2.0
      •0•0•0•0•Updated Apr 3, 2024Apr 3, 2024

    • wsidicom-data

      Public
      Test data for wsidicom
      Python
      •
      Apache License 2.0
      •0•0•0•0•Updated Dec 6, 2023Dec 6, 2023