Replace "sile" in the doc with "optuna".

Cargo.toml

@@ -4,13 +4,13 @@ version = "0.2.9"
 authors = ["Takeru Ohta <[email protected]>"]
 edition = "2018"
 description = "A black-box optimization benchmarking framework"
-homepage = "https://github.com/sile/kurobako"
-repository = "https://github.com/sile/kurobako"
+homepage = "https://github.com/optuna/kurobako"
+repository = "https://github.com/optuna/kurobako"
 readme = "README.md"
 license = "MIT"
 
 [badges]
-coveralls = {repository = "sile/kurobako"}
+coveralls = {repository = "optuna/kurobako"}
 
 [dependencies]
 chrono = { version = "0.4", features = ["serde"] }

README.md

@@ -3,8 +3,8 @@ kurobako
 
 [![kurobako](https://img.shields.io/crates/v/kurobako.svg)](https://crates.io/crates/kurobako)
 [![Documentation](https://docs.rs/kurobako/badge.svg)](https://docs.rs/kurobako)
-[![Actions Status](https://github.com/sile/kurobako/workflows/CI/badge.svg)](https://github.com/sile/kurobako/actions)
-[![Coverage Status](https://coveralls.io/repos/github/sile/kurobako/badge.svg?branch=master)](https://coveralls.io/github/sile/kurobako?branch=master)
+[![Actions Status](https://github.com/optuna/kurobako/workflows/CI/badge.svg)](https://github.com/optuna/kurobako/actions)
+[![Coverage Status](https://coveralls.io/repos/github/optuna/kurobako/badge.svg?branch=master)](https://coveralls.io/github/optuna/kurobako?branch=master)
 [![License: MIT](https://img.shields.io/badge/license-MIT-blue.svg)](LICENSE)
 [![Docker Hub](https://img.shields.io/badge/docker-ready-blue.svg)](https://hub.docker.com/r/sile/kurobako)
 
@@ -32,12 +32,12 @@ Installation
 Precompiled binaries for Linux are available in the [releases] page.
 
 ```console
-$ curl -L https://github.com/sile/kurobako/releases/download/${VERSION}/kurobako-${VERSION}.linux-amd64 -o kurobako
+$ curl -L https://github.com/optuna/kurobako/releases/download/${VERSION}/kurobako-${VERSION}.linux-amd64 -o kurobako
 $ chmod +x kurobako
 $ ./kurobako -h
 ```
 
-[releases]: https://github.com/sile/kurobako/releases
+[releases]: https://github.com/optuna/kurobako/releases
 
 ### Using Cargo
 
@@ -90,7 +90,7 @@ Solvers:
 - [Optuna](https://github.com/optuna/optuna)
 
 Problems:
-- [NASBench](https://github.com/automl/nas_benchmarks) ([detail](https://github.com/sile/kurobako/wiki/NASBench))
+- [NASBench](https://github.com/automl/nas_benchmarks) ([detail](https://github.com/optuna/kurobako/wiki/NASBench))
 - [HPOBench](https://github.com/automl/nas_benchmarks)
 - [sigopt/evalset](https://github.com/sigopt/evalset)
 - [Two-objective ZDT functions](http://repository.ias.ac.in/9404/1/306.pdf)

docker/Dockerfile

@@ -3,5 +3,5 @@ FROM alpine
 ARG KUROBAKO_VERSION=0.1.12
 
 RUN apk --update add && apk add gnuplot curl font-noto
-RUN curl -L https://github.com/sile/kurobako/releases/download/${KUROBAKO_VERSION}/kurobako-${KUROBAKO_VERSION}.linux-amd64 -o kurobako && chmod +x kurobako && mv kurobako /usr/local/bin/
+RUN curl -L https://github.com/optuna/kurobako/releases/download/${KUROBAKO_VERSION}/kurobako-${KUROBAKO_VERSION}.linux-amd64 -o kurobako && chmod +x kurobako && mv kurobako /usr/local/bin/
 ENTRYPOINT ["kurobako"]

kurobako_core/Cargo.toml

@@ -4,14 +4,13 @@ version = "0.1.11"
 authors = ["Takeru Ohta <[email protected]>"]
 edition = "2018"
 description = "Core crate for `kurobako`"
-homepage = "https://github.com/sile/kurobako"
-repository = "https://github.com/sile/kurobako"
+homepage = "https://github.com/optuna/kurobako"
+repository = "https://github.com/optuna/kurobako"
 readme = "README.md"
 license = "MIT"
 
 [badges]
-travis-ci = {repository = "sile/kurobako"}
-codecov = {repository = "sile/kurobako"}
+coveralls = {repository = "optuna/kurobako"}
 
 [dependencies]
 itertools = "0.10"

kurobako_core/README.md

@@ -3,8 +3,8 @@ kurobako_core
 
 [![kurobako_core](https://img.shields.io/crates/v/kurobako_core.svg)](https://crates.io/crates/kurobako_core)
 [![Documentation](https://docs.rs/kurobako_core/badge.svg)](https://docs.rs/kurobako_core)
-[![Build Status](https://travis-ci.org/sile/kurobako.svg?branch=master)](https://travis-ci.org/sile/kurobako)
+[![Actions Status](https://github.com/optuna/kurobako/workflows/CI/badge.svg)](https://github.com/optuna/kurobako/actions)
 [![License: MIT](https://img.shields.io/badge/license-MIT-blue.svg)](LICENSE)
 
 
-The core crate of [`kurobako_core`](https://github.com/sile/kurobako).
+The core crate of [`kurobako_core`](https://github.com/optuna/kurobako).

kurobako_core/src/hypervolume.rs

@@ -11,11 +11,11 @@ pub fn compute(pts: &[Vec<f64>], ref_pt: &[f64]) -> f64 {
 
 fn get_hypervolume_recursive(pts: &[Vec<f64>], ref_pt: &[f64]) -> f64 {
     match pts.len() {
-        1 => get_hypervolume_two_points(&pts[0], &ref_pt),
+        1 => get_hypervolume_two_points(&pts[0], ref_pt),
         2 => {
-            get_hypervolume_two_points(&pts[0], &ref_pt)
-                + get_hypervolume_two_points(&pts[1], &ref_pt)
-                - get_hypervolume_two_points(&get_max_coordinates(&pts[0], &pts[1]), &ref_pt)
+            get_hypervolume_two_points(&pts[0], ref_pt)
+                + get_hypervolume_two_points(&pts[1], ref_pt)
+                - get_hypervolume_two_points(&get_max_coordinates(&pts[0], &pts[1]), ref_pt)
         }
         _ => {
             // get_exclusive_hypervolume depends on the points being sorted by the first dimension.
@@ -54,7 +54,7 @@ fn get_exclusive_hypervolume(pt: &[f64], pts: &[Vec<f64>], ref_pt: &[f64]) -> f6
 
     if !pts.is_empty() {
         let intersection_pts: Vec<Vec<f64>> = (0..pts.len())
-            .map(|i| get_max_coordinates(&pts[i], &pt))
+            .map(|i| get_max_coordinates(&pts[i], pt))
             .collect();
 
         limited_pts.push(intersection_pts[0].to_vec());

kurobako_core/src/lib.rs

@@ -1,4 +1,4 @@
-//! The core crate of [`kurobako`](https://github.com/sile/kurobako).
+//! The core crate of [`kurobako`](https://github.com/optuna/kurobako).
 #![warn(missing_docs)]
 
 #[macro_use]

kurobako_core/src/registry.rs

@@ -38,12 +38,12 @@ impl FactoryRegistry {
 
     /// Creates a problem factory associated with the given recipe JSON.
     pub fn create_problem_factory_from_json(&self, json: &JsonRecipe) -> Result<BoxProblemFactory> {
-        track!((self.create_problem_factory)(&json, self); json)
+        track!((self.create_problem_factory)(json, self); json)
     }
 
     /// Creates a solver factory associated with the given recipe JSON.
     pub fn create_solver_factory_from_json(&self, json: &JsonRecipe) -> Result<BoxSolverFactory> {
-        track!((self.create_solver_factory)(&json, self); json)
+        track!((self.create_solver_factory)(json, self); json)
     }
 }
 impl fmt::Debug for FactoryRegistry {

kurobako_problems/Cargo.toml

@@ -4,14 +4,13 @@ version = "0.1.13"
 authors = ["Takeru Ohta <[email protected]>"]
 edition = "2018"
 description = "A collection of black-box optimization problems"
-homepage = "https://github.com/sile/kurobako"
-repository = "https://github.com/sile/kurobako"
+homepage = "https://github.com/optuna/kurobako"
+repository = "https://github.com/optuna/kurobako"
 readme = "README.md"
 license = "MIT"
 
 [badges]
-travis-ci = {repository = "sile/kurobako"}
-codecov = {repository = "sile/kurobako"}
+coveralls = {repository = "optuna/kurobako"}
 
 [dependencies]
 hdf5file = "0.1"

kurobako_problems/README.md

@@ -3,7 +3,7 @@ kurobako_problems
 
 [![kurobako_problems](https://img.shields.io/crates/v/kurobako_problems.svg)](https://crates.io/crates/kurobako_problems)
 [![Documentation](https://docs.rs/kurobako_problems/badge.svg)](https://docs.rs/kurobako_problems)
-[![Build Status](https://travis-ci.org/sile/kurobako.svg?branch=master)](https://travis-ci.org/sile/kurobako)
+[![Actions Status](https://github.com/optuna/kurobako/workflows/CI/badge.svg)](https://github.com/optuna/kurobako/actions)
 [![License: MIT](https://img.shields.io/badge/license-MIT-blue.svg)](LICENSE)
 
-Built-in problems of [`kurobako`](https://github.com/sile/kurobako).
+Built-in problems of [`kurobako`](https://github.com/optuna/kurobako).

kurobako_problems/src/lib.rs

@@ -1,4 +1,4 @@
-//! Built-in problems of [`kurobako`](https://github.com/sile/kurobako).
+//! Built-in problems of [`kurobako`](https://github.com/optuna/kurobako).
 #![warn(missing_docs)]
 
 #[macro_use]

kurobako_problems/src/surrogate.rs

@@ -59,7 +59,7 @@ impl ProblemRecipe for SurrogateProblemRecipe {
         } else {
             let mut cache = track!(CACHE.lock().map_err(Error::from))?;
             if let Some(model) = cache.get(&model_path) {
-                Arc::clone(&model)
+                Arc::clone(model)
             } else {
                 let model = track!(self.load_model(&model_path))?;
                 cache.insert(model_path, Arc::clone(&model));

kurobako_solvers/Cargo.toml

@@ -4,14 +4,13 @@ version = "0.2.1"
 authors = ["Takeru Ohta <[email protected]>"]
 edition = "2018"
 description = "A collection of black-box optimization solvers"
-homepage = "https://github.com/sile/kurobako"
-repository = "https://github.com/sile/kurobako"
+homepage = "https://github.com/optuna/kurobako"
+repository = "https://github.com/optuna/kurobako"
 readme = "README.md"
 license = "MIT"
 
 [badges]
-travis-ci = {repository = "sile/kurobako"}
-codecov = {repository = "sile/kurobako"}
+coveralls = {repository = "optuna/kurobako"}
 
 [dependencies]
 kurobako_core = { path = "../kurobako_core/", version = "0.1" }

kurobako_solvers/README.md

@@ -3,7 +3,7 @@ kurobako_solvers
 
 [![kurobako_solvers](https://img.shields.io/crates/v/kurobako_solvers.svg)](https://crates.io/crates/kurobako_solvers)
 [![Documentation](https://docs.rs/kurobako_solvers/badge.svg)](https://docs.rs/kurobako_solvers)
-[![Build Status](https://travis-ci.org/sile/kurobako.svg?branch=master)](https://travis-ci.org/sile/kurobako)
+[![Actions Status](https://github.com/optuna/kurobako/workflows/CI/badge.svg)](https://github.com/optuna/kurobako/actions)
 [![License: MIT](https://img.shields.io/badge/license-MIT-blue.svg)](LICENSE)
 
-Built-in solvers of [`kurobako`](https://github.com/sile/kurobako).
+Built-in solvers of [`kurobako`](https://github.com/optuna/kurobako).

kurobako_solvers/src/lib.rs

@@ -1,4 +1,4 @@
-//! Built-in solvers of [`kurobako`](https://github.com/sile/kurobako).
+//! Built-in solvers of [`kurobako`](https://github.com/optuna/kurobako).
 #![warn(missing_docs)]
 
 #[macro_use]

src/plot/curve.rs

@@ -106,7 +106,7 @@ impl PlotCurveOpt {
         let pb = ProgressBar::new(problems.len() as u64);
         let template =
             "(PLOT) [{elapsed_precise}] [{pos}/{len} {percent:>3}%] [ETA {eta:>3}] {msg}";
-        pb.set_style(ProgressStyle::default_bar().template(&template));
+        pb.set_style(ProgressStyle::default_bar().template(template));
 
         track!(fs::create_dir_all(&self.output_dir).map_err(Error::from); self.output_dir)?;
 

src/plot/pareto_front.rs

@@ -63,7 +63,7 @@ impl PlotParetoFrontOpt {
         let pb = ProgressBar::new(studies.len() as u64);
         let template =
             "(PLOT) [{elapsed_precise}] [{pos}/{len} {percent:>3}%] [ETA {eta:>3}] {msg}";
-        pb.set_style(ProgressStyle::default_bar().template(&template));
+        pb.set_style(ProgressStyle::default_bar().template(template));
 
         track!(fs::create_dir_all(&self.output_dir).map_err(Error::from); self.output_dir)?;
 

src/plot/slice.rs

@@ -59,7 +59,7 @@ impl PlotSliceOpt {
             ProgressBar::new(studies.iter().map(|(_, s)| s.params_len()).sum::<usize>() as u64);
         let template =
             "(PLOT) [{elapsed_precise}] [{pos}/{len} {percent:>3}%] [ETA {eta:>3}] {msg}";
-        pb.set_style(ProgressStyle::default_bar().template(&template));
+        pb.set_style(ProgressStyle::default_bar().template(template));
 
         track!(fs::create_dir_all(&self.output_dir).map_err(Error::from); self.output_dir)?;
 

src/report.rs

@@ -79,7 +79,7 @@ impl Reporter {
 
         let mut list = writer.list();
         track!(list.item(&format!(
-            "Kurobako Version: [{}](https://github.com/sile/kurobako/tree/{})",
+            "Kurobako Version: [{}](https://github.com/optuna/kurobako/tree/{})",
             env!("CARGO_PKG_VERSION"),
             env!("CARGO_PKG_VERSION"),
         )))?;