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20 changes: 17 additions & 3 deletions config.c
Original file line number Diff line number Diff line change
Expand Up @@ -2316,10 +2316,24 @@ int git_config_get_virtualfilesystem(void)
if (core_virtualfilesystem && !*core_virtualfilesystem)
core_virtualfilesystem = NULL;

/* virtual file system relies on the sparse checkout logic so force it on */
if (core_virtualfilesystem) {
core_apply_sparse_checkout = 1;
return 1;
/*
* Some git commands spawn helpers and redirect the index to a different
* location. These include "difftool -d" and the sequencer
* (i.e. `git rebase -i`, `git cherry-pick` and `git revert`) and others.
* In those instances we don't want to update their temporary index with
* our virtualization data.
*/
char *default_index_file = xstrfmt("%s/%s", the_repository->gitdir, "index");
int should_run_hook = !strcmp(default_index_file, the_repository->index_file);

free(default_index_file);
if (should_run_hook) {
/* virtual file system relies on the sparse checkout logic so force it on */
core_apply_sparse_checkout = 1;
return 1;
}
core_virtualfilesystem = NULL;
}

return 0;
Expand Down