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@jmikedupont2 jmikedupont2 commented Aug 5, 2025

PR Type

Enhancement, Documentation


Description

• Added DYIM embedding pipeline with directory vector embeddings and project tree structure mapping
• Created comprehensive documentation including branching strategy SOP and embedding pipeline work log
• Added directory_vectors.json with 8-dimensional embeddings for 165 project directories
• Added tree_level_3.json with complete hierarchical project structure (165 directories, 617 files)
• Documented compilation challenges with sophia_rs library and API compatibility issues
• Included build logs with memory monitoring and troubleshooting guidance
• Updated documentation index to reference new SOPs and work logs


Diagram Walkthrough

flowchart LR
  A["Project Structure"] --> B["tree_level_3.json"]
  A --> C["directory_vectors.json"]
  B --> D["Embedding Pipeline"]
  C --> D
  D --> E["DYIM System"]
  F["Documentation"] --> G["Branching Strategy SOP"]
  F --> H["Work Log"]
  F --> I["Build Logs"]
Loading

File Walkthrough

Relevant files
Miscellaneous
newlogs.txt
Bootstrap Command Execution Logs with Memory Monitoring   

comms/gemini/outbox/newlogs.txt

• Added comprehensive build logs showing bootstrap command execution
with memory monitoring
• Includes compilation warnings for unused
imports in ragit-command-bootstrap
• Shows detailed file processing
logs with memory usage tracking over 109 iterations
• Contains verbose
debugging output for file copying and index operations

+1323/-0
Documentation
reponse.md
Vector Decoration SOP and Strategic Compilation Fix Plan 

comms/xai/outbox/reponse.md

• Added comprehensive SOP for vector decoration and interactive
sorting functionality
• Includes strategic plan for resolving
sophia_rs compilation issues
• Provides detailed troubleshooting steps
and dependency management guidance
• Contains analysis of memory usage
issues and worker optimization recommendations

+221/-0 
dwim_embedding_pipeline_work_log.md
DYIM Embedding Pipeline Development Work Log                         

docs/quality_procedures/dwim_embedding_pipeline_work_log.md

• Added work log documenting DYIM embedding pipeline development
progress
• Details compilation errors with sophia_rs library and API
incompatibilities
• Documents attempted fixes and challenges with
dependency management
• Outlines next steps for addressing
compatibility issues

+47/-0   
branching_strategy_sop.md
Branching Strategy Standard Operating Procedure                   

docs/quality_procedures/branching_strategy_sop.md

• Added SOP defining branching strategy for the ragit project

Includes naming conventions for feature and bugfix branches
• Provides
step-by-step procedures for handling submodule branches
• Documents
best practices for isolation and traceability

+53/-0   
index.md
Documentation Index Updates for New SOPs                                 

docs/index.md

• Added links to new documentation files in the index
• Included
references to Branching Strategy SOP and DWIM Embedding Pipeline Work
Log

+2/-0     
Enhancement
directory_vectors.json
Add directory embedding vectors for DYIM pipeline               

directory_vectors.json

• Added a new JSON file containing directory embeddings with
8-dimensional vectors
• Contains 165 directory paths mapped to their
corresponding embedding vectors
• Vectors appear to be normalized
floating-point values representing semantic embeddings
• Includes
directories from the entire project structure including crates, docs,
vendor, tests, etc.

+1652/-0
tree_level_3.json
Add project tree structure for embedding analysis               

tree_level_3.json

• Added a comprehensive JSON representation of the project's directory
structure
• Contains hierarchical tree structure with file and
directory type annotations
• Includes metadata showing 165 directories
and 617 files total
• Provides complete mapping of project filesystem
for embedding pipeline processing

+841/-0 

Description by Korbit AI

What change is being made?

Add a new Standard Operating Procedure (SOP) document vector_decoration_sop.md for decorating index items with vectors and enabling interactive sorting in the CLI, along with strategic resolutions for compilation issues in the ragit-dyim pipeline.

Why are these changes being made?

The changes address the need for a high-level procedural guide to enhance semantic file handling within the ragit project, facilitating vector space embedding and user interactivity in sorting operations. The SOP also assists in troubleshooting and managing dependency issues affecting the ragit-dyim pipeline, ensuring the project's robustness and functionality are maintained.

Is this description stale? Ask me to generate a new description by commenting /korbit-generate-pr-description

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korbit-ai bot commented Aug 5, 2025

Korbit doesn't automatically review large (3000+ lines changed) pull requests such as this one. If you want me to review anyway, use /korbit-review.

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qodo-merge-pro bot commented Aug 5, 2025

PR Reviewer Guide 🔍

Here are some key observations to aid the review process:

⏱️ Estimated effort to review: 4 🔵🔵🔵🔵⚪
🧪 No relevant tests
🔒 No security concerns identified
⚡ Recommended focus areas for review

Memory Leak

The build process shows continuous memory growth from 4498500 KB to over 10833392 KB across 109 iterations with no files processed and no chunks committed. This indicates a potential memory leak in the build_chunks or worker pipeline that needs investigation.

Memory Usage (Initial): Total: 11356012 KB, Used: 4498500 KB, Process RSS: 10080 KB
bootstrap_index_self: Created temporary directory: "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap"
bootstrap_index_self: Initialized new index in "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap"
Memory Usage (After index initialization): Total: 11356012 KB, Used: 4498920 KB, Process RSS: 10080 KB
bootstrap_index_self: Running rag add
bootstrap_index_self: Found project root: "/data/data/com.termux/files/home/storage/github/ragit"
CargoPackageFileSource: Getting files for package 'ragit-command-bootstrap' in project root '/data/data/com.termux/files/home/storage/github/ragit'
CargoPackageFileSource: 'cargo pkgid' output:
path+file:///data/data/com.termux/files/home/storage/github/ragit/crates/ragit-command-bootstrap#0.1.0

CargoPackageFileSource: Found files: ["/data/data/com.termux/files/home/storage/github/ragit/crates/ragit-command-bootstrap/src/lib.rs", "/data/data/com.termux/files/home/storage/github/ragit/crates/ragit-command-bootstrap/tests/bootstrap_test.rs"]
bootstrap_index_self: Found 2 files to add
bootstrap_index_self: going to add /data/data/com.termux/files/home/storage/github/ragit/crates/ragit-command-bootstrap/src/lib.rs
bootstrap_index_self: original_file_path: "/data/data/com.termux/files/home/storage/github/ragit/crates/ragit-command-bootstrap/src/lib.rs"
bootstrap_index_self: actual_root_dir: "/data/data/com.termux/files/home/storage/github/ragit"
bootstrap_index_self: relative_path (after strip_prefix): "crates/ragit-command-bootstrap/src/lib.rs"
bootstrap_index_self: relative_path (adjusted): "crates/ragit-command-bootstrap/src/lib.rs"
bootstrap_index_self: temp_dir: "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap"
bootstrap_index_self: temp_file_path: "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/crates/ragit-command-bootstrap/src/lib.rs"
bootstrap_index_self: Created parent directory: "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/crates/ragit-command-bootstrap/src"
bootstrap_index_self: Checking if original_file_path exists: true
bootstrap_index_self: Checking if original_file_path is readable: true
bootstrap_index_self: Checking if parent_dir is writable: true
bootstrap_index_self: Copied file "/data/data/com.termux/files/home/storage/github/ragit/crates/ragit-command-bootstrap/src/lib.rs" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/crates/ragit-command-bootstrap/src/lib.rs"
bootstrap_index_self: going to add /data/data/com.termux/files/home/storage/github/ragit/crates/ragit-command-bootstrap/tests/bootstrap_test.rs
bootstrap_index_self: original_file_path: "/data/data/com.termux/files/home/storage/github/ragit/crates/ragit-command-bootstrap/tests/bootstrap_test.rs"
bootstrap_index_self: actual_root_dir: "/data/data/com.termux/files/home/storage/github/ragit"
bootstrap_index_self: relative_path (after strip_prefix): "crates/ragit-command-bootstrap/tests/bootstrap_test.rs"
bootstrap_index_self: relative_path (adjusted): "crates/ragit-command-bootstrap/tests/bootstrap_test.rs"
bootstrap_index_self: temp_dir: "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap"
bootstrap_index_self: temp_file_path: "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/crates/ragit-command-bootstrap/tests/bootstrap_test.rs"
bootstrap_index_self: Created parent directory: "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/crates/ragit-command-bootstrap/tests"
bootstrap_index_self: Checking if original_file_path exists: true
bootstrap_index_self: Checking if original_file_path is readable: true
bootstrap_index_self: Checking if parent_dir is writable: true
bootstrap_index_self: Copied file "/data/data/com.termux/files/home/storage/github/ragit/crates/ragit-command-bootstrap/tests/bootstrap_test.rs" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/crates/ragit-command-bootstrap/tests/bootstrap_test.rs"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/agent.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/agent.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/answer_query.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/answer_query.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/describe_image.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/describe_image.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/extract_keyword.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/extract_keyword.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/multi_turn.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/multi_turn.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/raw.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/raw.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/rerank_summary.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/rerank_summary.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/summarize.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/summarize.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/summarize_chunks.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/summarize_chunks.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/muse_calliope.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/muse_calliope.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/muse_clio.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/muse_clio.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/muse_erato.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/muse_erato.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/muse_euterpe.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/muse_euterpe.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/muse_melpomene.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/muse_melpomene.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/muse_polyhymnia.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/muse_polyhymnia.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/muse_terpsichore.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/muse_terpsichore.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/muse_thalia.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/muse_thalia.pdl"
bootstrap_index_self: Copied prompt "/data/data/com.termux/files/home/storage/github/ragit/prompts/muse_urania.pdl" to "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/prompts/muse_urania.pdl"
bootstrap_index_self: Before add_files_command
Memory Usage (Before add_files_command): Total: 11356012 KB, Used: 4516252 KB, Process RSS: 10080 KB
bootstrap_index_self: After add_files_command
bootstrap_index_self: Added files to index
Memory Usage (After add_files_command): Total: 11356012 KB, Used: 4516252 KB, Process RSS: 10080 KB
bootstrap_index_self: Running rag build
bootstrap_index_self: Before ragit_index_effects::build
Memory Usage (Before ragit_index_effects::build): Total: 11356012 KB, Used: 4516252 KB, Process RSS: 10080 KB
build_worker: Starting
build_worker: Initializing workers
build_worker: Sending file "crates/ragit-command-bootstrap/tests/bootstrap_test.rs" to worker 0
build_worker: Sending file "crates/ragit-command-bootstrap/src/lib.rs" to worker 1
build_worker: No more files to process, killing worker 2
build_worker: No more files to process, killing worker 3
build_worker: No more files to process, killing worker 4
build_worker: No more files to process, killing worker 5
build_worker: No more files to process, killing worker 6
build_worker: No more files to process, killing worker 7
build_worker: Saving index state
build_worker: Entering main loop
build_chunks: file received: "crates/ragit-command-bootstrap/src/lib.rs"
index_get_data_path: root_dir: "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap"
index_get_data_path: file: "crates/ragit-command-bootstrap/src/lib.rs"
index_get_data_path: full_path: "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/crates/ragit-command-bootstrap/src/lib.rs"
build_chunks: real_path obtained: "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/crates/ragit-command-bootstrap/src/lib.rs"
build_chunks: Calling FileReader::new with:
  file.to_string_lossy().into_owned(): "crates/ragit-command-bootstrap/src/lib.rs"
  real_path.to_string_lossy().into_owned(): "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/crates/ragit-command-bootstrap/src/lib.rs"
  index.root_dir.to_str().unwrap(): "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap"
build_chunks: file received: "crates/ragit-command-bootstrap/tests/bootstrap_test.rs"
index_get_data_path: root_dir: "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap"
index_get_data_path: file: "crates/ragit-command-bootstrap/tests/bootstrap_test.rs"
index_get_data_path: full_path: "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/crates/ragit-command-bootstrap/tests/bootstrap_test.rs"
build_chunks: real_path obtained: "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/crates/ragit-command-bootstrap/tests/bootstrap_test.rs"
build_chunks: Calling FileReader::new with:
  file.to_string_lossy().into_owned(): "crates/ragit-command-bootstrap/tests/bootstrap_test.rs"
  real_path.to_string_lossy().into_owned(): "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap/crates/ragit-command-bootstrap/tests/bootstrap_test.rs"
  index.root_dir.to_str().unwrap(): "/data/data/com.termux/files/home/storage/github/ragit/tmp_bootstrap"
build_chunks: FileReader initialized. Can generate chunk: false
build_chunks: Processing file: "crates/ragit-command-bootstrap/tests/bootstrap_test.rs"
build_chunks: File size: 0 bytes
---
elapsed time: 00:00
staged files: 2, processed files: 0
errors: 0
committed chunks: 0
Iteration 0: Memory Usage: Total: 11356012 KB, Used: 4519528 KB (Delta: 4519528 KB, Delta Since Beginning: 0 KB, Avg Delta Per Loop: 0 KB)
currently processing files: crates/ragit-command-bootstrap/tests/bootstrap_test.rs, crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
flush count: 0
model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
build_worker: Received FileComplete from worker 0
build_worker: No more files to process, killing worker 0
---
elapsed time: 00:00
staged files: 2, processed files: 0
errors: 0
committed chunks: 0
Iteration 1: Memory Usage: Total: 11356012 KB, Used: 4531600 KB (Delta: 12072 KB, Delta Since Beginning: 12072 KB, Avg Delta Per Loop: 4531600 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
flush count: 0
model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
elapsed time: 00:00
staged files: 2, processed files: 0
errors: 0
committed chunks: 0
Iteration 2: Memory Usage: Total: 11356012 KB, Used: 4531600 KB (Delta: 0 KB, Delta Since Beginning: 12072 KB, Avg Delta Per Loop: 2265800 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
flush count: 0
model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
elapsed time: 00:00
staged files: 2, processed files: 0
errors: 0
committed chunks: 0
Iteration 3: Memory Usage: Total: 11356012 KB, Used: 4532104 KB (Delta: 504 KB, Delta Since Beginning: 12576 KB, Avg Delta Per Loop: 1510701 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
flush count: 0
model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
elapsed time: 00:00
staged files: 2, processed files: 0
errors: 0
committed chunks: 0
Iteration 4: Memory Usage: Total: 11356012 KB, Used: 4532356 KB (Delta: 252 KB, Delta Since Beginning: 12828 KB, Avg Delta Per Loop: 1133089 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
flush count: 0
model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
elapsed time: 00:00
staged files: 2, processed files: 0
errors: 0
committed chunks: 0
Iteration 5: Memory Usage: Total: 11356012 KB, Used: 4532356 KB (Delta: 0 KB, Delta Since Beginning: 12828 KB, Avg Delta Per Loop: 906471 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
flush count: 0
model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
elapsed time: 00:00
staged files: 2, processed files: 0
errors: 0
committed chunks: 0
Iteration 6: Memory Usage: Total: 11356012 KB, Used: 4532860 KB (Delta: 504 KB, Delta Since Beginning: 13332 KB, Avg Delta Per Loop: 755476 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
flush count: 0
model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
elapsed time: 00:00
staged files: 2, processed files: 0
errors: 0
committed chunks: 0
Iteration 7: Memory Usage: Total: 11356012 KB, Used: 4532840 KB (Delta: -20 KB, Delta Since Beginning: 13312 KB, Avg Delta Per Loop: 647548 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
flush count: 0
model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
elapsed time: 00:00
staged files: 2, processed files: 0
errors: 0
committed chunks: 0
Iteration 8: Memory Usage: Total: 11356012 KB, Used: 4532840 KB (Delta: 0 KB, Delta Since Beginning: 13312 KB, Avg Delta Per Loop: 566605 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
flush count: 0
model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
elapsed time: 00:00
staged files: 2, processed files: 0
errors: 0
committed chunks: 0
Iteration 9: Memory Usage: Total: 11356012 KB, Used: 4532840 KB (Delta: 0 KB, Delta Since Beginning: 13312 KB, Avg Delta Per Loop: 503648 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
flush count: 0
model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
elapsed time: 00:01
staged files: 2, processed files: 0
errors: 0
committed chunks: 0
Iteration 10: Memory Usage: Total: 11356012 KB, Used: 4531068 KB (Delta: -1772 KB, Delta Since Beginning: 11540 KB, Avg Delta Per Loop: 453106 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
flush count: 0
model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
elapsed time: 00:01
staged files: 2, processed files: 0
errors: 0
committed chunks: 0
Iteration 11: Memory Usage: Total: 11356012 KB, Used: 4792760 KB (Delta: 261692 KB, Delta Since Beginning: 273232 KB, Avg Delta Per Loop: 435705 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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errors: 0
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Iteration 12: Memory Usage: Total: 11356012 KB, Used: 4962104 KB (Delta: 169344 KB, Delta Since Beginning: 442576 KB, Avg Delta Per Loop: 413508 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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errors: 0
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Iteration 13: Memory Usage: Total: 11356012 KB, Used: 4962104 KB (Delta: 0 KB, Delta Since Beginning: 442576 KB, Avg Delta Per Loop: 381700 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 14: Memory Usage: Total: 11356012 KB, Used: 4962104 KB (Delta: 0 KB, Delta Since Beginning: 442576 KB, Avg Delta Per Loop: 354436 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 15: Memory Usage: Total: 11356012 KB, Used: 4962104 KB (Delta: 0 KB, Delta Since Beginning: 442576 KB, Avg Delta Per Loop: 330806 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 16: Memory Usage: Total: 11356012 KB, Used: 4962104 KB (Delta: 0 KB, Delta Since Beginning: 442576 KB, Avg Delta Per Loop: 310131 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 17: Memory Usage: Total: 11356012 KB, Used: 4962032 KB (Delta: -72 KB, Delta Since Beginning: 442504 KB, Avg Delta Per Loop: 291884 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 18: Memory Usage: Total: 11356012 KB, Used: 4962032 KB (Delta: 0 KB, Delta Since Beginning: 442504 KB, Avg Delta Per Loop: 275668 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 19: Memory Usage: Total: 11356012 KB, Used: 4965608 KB (Delta: 3576 KB, Delta Since Beginning: 446080 KB, Avg Delta Per Loop: 261347 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 20: Memory Usage: Total: 11356012 KB, Used: 4965604 KB (Delta: -4 KB, Delta Since Beginning: 446076 KB, Avg Delta Per Loop: 248280 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 21: Memory Usage: Total: 11356012 KB, Used: 4965604 KB (Delta: 0 KB, Delta Since Beginning: 446076 KB, Avg Delta Per Loop: 236457 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 22: Memory Usage: Total: 11356012 KB, Used: 5325964 KB (Delta: 360360 KB, Delta Since Beginning: 806436 KB, Avg Delta Per Loop: 242089 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 23: Memory Usage: Total: 11356012 KB, Used: 5742544 KB (Delta: 416580 KB, Delta Since Beginning: 1223016 KB, Avg Delta Per Loop: 249675 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 24: Memory Usage: Total: 11356012 KB, Used: 6155824 KB (Delta: 413280 KB, Delta Since Beginning: 1636296 KB, Avg Delta Per Loop: 256492 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 25: Memory Usage: Total: 11356012 KB, Used: 5846120 KB (Delta: -309704 KB, Delta Since Beginning: 1326592 KB, Avg Delta Per Loop: 233844 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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staged files: 2, processed files: 0
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Iteration 26: Memory Usage: Total: 11356012 KB, Used: 5846372 KB (Delta: 252 KB, Delta Since Beginning: 1326844 KB, Avg Delta Per Loop: 224860 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 27: Memory Usage: Total: 11356012 KB, Used: 5846372 KB (Delta: 0 KB, Delta Since Beginning: 1326844 KB, Avg Delta Per Loop: 216532 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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staged files: 2, processed files: 0
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Iteration 28: Memory Usage: Total: 11356012 KB, Used: 5846372 KB (Delta: 0 KB, Delta Since Beginning: 1326844 KB, Avg Delta Per Loop: 208799 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 29: Memory Usage: Total: 11356012 KB, Used: 5846372 KB (Delta: 0 KB, Delta Since Beginning: 1326844 KB, Avg Delta Per Loop: 201599 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 30: Memory Usage: Total: 11356012 KB, Used: 5846364 KB (Delta: -8 KB, Delta Since Beginning: 1326836 KB, Avg Delta Per Loop: 194878 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 31: Memory Usage: Total: 11356012 KB, Used: 5846856 KB (Delta: 492 KB, Delta Since Beginning: 1327328 KB, Avg Delta Per Loop: 188608 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 32: Memory Usage: Total: 11356012 KB, Used: 5846856 KB (Delta: 0 KB, Delta Since Beginning: 1327328 KB, Avg Delta Per Loop: 182714 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 33: Memory Usage: Total: 11356012 KB, Used: 5847104 KB (Delta: 248 KB, Delta Since Beginning: 1327576 KB, Avg Delta Per Loop: 177184 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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staged files: 2, processed files: 0
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Iteration 34: Memory Usage: Total: 11356012 KB, Used: 5847104 KB (Delta: 0 KB, Delta Since Beginning: 1327576 KB, Avg Delta Per Loop: 171973 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 35: Memory Usage: Total: 11356012 KB, Used: 5847608 KB (Delta: 504 KB, Delta Since Beginning: 1328080 KB, Avg Delta Per Loop: 167074 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 36: Memory Usage: Total: 11356012 KB, Used: 5847608 KB (Delta: 0 KB, Delta Since Beginning: 1328080 KB, Avg Delta Per Loop: 162433 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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staged files: 2, processed files: 0
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Iteration 37: Memory Usage: Total: 11356012 KB, Used: 5847608 KB (Delta: 0 KB, Delta Since Beginning: 1328080 KB, Avg Delta Per Loop: 158043 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 38: Memory Usage: Total: 11356012 KB, Used: 5878760 KB (Delta: 31152 KB, Delta Since Beginning: 1359232 KB, Avg Delta Per Loop: 154704 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
buffered files: 2, buffered chunks: 0
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 39: Memory Usage: Total: 11356012 KB, Used: 5934700 KB (Delta: 55940 KB, Delta Since Beginning: 1415172 KB, Avg Delta Per Loop: 152171 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 40: Memory Usage: Total: 11356012 KB, Used: 5989160 KB (Delta: 54460 KB, Delta Since Beginning: 1469632 KB, Avg Delta Per Loop: 149729 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 41: Memory Usage: Total: 11356012 KB, Used: 6048632 KB (Delta: 59472 KB, Delta Since Beginning: 1529104 KB, Avg Delta Per Loop: 147527 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 42: Memory Usage: Total: 11356012 KB, Used: 6107096 KB (Delta: 58464 KB, Delta Since Beginning: 1587568 KB, Avg Delta Per Loop: 145407 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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model: default_model
input tokens: 0 (0.000$), output tokens: 0 (0.000$)
---
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Iteration 43: Memory Usage: Total: 11356012 KB, Used: 6167972 KB (Delta: 60876 KB, Delta Since Beginning: 1648444 KB, Avg Delta Per Loop: 143441 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 44: Memory Usage: Total: 11356012 KB, Used: 6225888 KB (Delta: 57916 KB, Delta Since Beginning: 1706360 KB, Avg Delta Per Loop: 141497 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 45: Memory Usage: Total: 11356012 KB, Used: 6281328 KB (Delta: 55440 KB, Delta Since Beginning: 1761800 KB, Avg Delta Per Loop: 139585 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 46: Memory Usage: Total: 11356012 KB, Used: 6700656 KB (Delta: 419328 KB, Delta Since Beginning: 2181128 KB, Avg Delta Per Loop: 145666 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 47: Memory Usage: Total: 11356012 KB, Used: 7110224 KB (Delta: 409568 KB, Delta Since Beginning: 2590696 KB, Avg Delta Per Loop: 151281 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 48: Memory Usage: Total: 11356012 KB, Used: 7514932 KB (Delta: 404708 KB, Delta Since Beginning: 2995404 KB, Avg Delta Per Loop: 156561 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 49: Memory Usage: Total: 11356012 KB, Used: 7936780 KB (Delta: 421848 KB, Delta Since Beginning: 3417252 KB, Avg Delta Per Loop: 161975 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 50: Memory Usage: Total: 11356012 KB, Used: 8352868 KB (Delta: 416088 KB, Delta Since Beginning: 3833340 KB, Avg Delta Per Loop: 167057 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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input tokens: 0 (0.000$), output tokens: 0 (0.000$)
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Iteration 51: Memory Usage: Total: 11356012 KB, Used: 8527228 KB (Delta: 174360 KB, Delta Since Beginning: 4007700 KB, Avg Delta Per Loop: 167200 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 52: Memory Usage: Total: 11356012 KB, Used: 8534480 KB (Delta: 7252 KB, Delta Since Beginning: 4014952 KB, Avg Delta Per Loop: 164124 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 53: Memory Usage: Total: 11356012 KB, Used: 7061420 KB (Delta: -1473060 KB, Delta Since Beginning: 2541892 KB, Avg Delta Per Loop: 133234 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 54: Memory Usage: Total: 11356012 KB, Used: 7061420 KB (Delta: 0 KB, Delta Since Beginning: 2541892 KB, Avg Delta Per Loop: 130767 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 55: Memory Usage: Total: 11356012 KB, Used: 7061924 KB (Delta: 504 KB, Delta Since Beginning: 2542396 KB, Avg Delta Per Loop: 128398 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 56: Memory Usage: Total: 11356012 KB, Used: 7062680 KB (Delta: 756 KB, Delta Since Beginning: 2543152 KB, Avg Delta Per Loop: 126119 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 57: Memory Usage: Total: 11356012 KB, Used: 7062668 KB (Delta: -12 KB, Delta Since Beginning: 2543140 KB, Avg Delta Per Loop: 123906 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 58: Memory Usage: Total: 11356012 KB, Used: 7062668 KB (Delta: 0 KB, Delta Since Beginning: 2543140 KB, Avg Delta Per Loop: 121770 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 59: Memory Usage: Total: 11356012 KB, Used: 7063172 KB (Delta: 504 KB, Delta Since Beginning: 2543644 KB, Avg Delta Per Loop: 119714 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 60: Memory Usage: Total: 11356012 KB, Used: 7063172 KB (Delta: 0 KB, Delta Since Beginning: 2543644 KB, Avg Delta Per Loop: 117719 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 61: Memory Usage: Total: 11356012 KB, Used: 7063172 KB (Delta: 0 KB, Delta Since Beginning: 2543644 KB, Avg Delta Per Loop: 115789 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 62: Memory Usage: Total: 11356012 KB, Used: 7063408 KB (Delta: 236 KB, Delta Since Beginning: 2543880 KB, Avg Delta Per Loop: 113925 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 63: Memory Usage: Total: 11356012 KB, Used: 7066836 KB (Delta: 3428 KB, Delta Since Beginning: 2547308 KB, Avg Delta Per Loop: 112172 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 64: Memory Usage: Total: 11356012 KB, Used: 7066828 KB (Delta: -8 KB, Delta Since Beginning: 2547300 KB, Avg Delta Per Loop: 110419 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 65: Memory Usage: Total: 11356012 KB, Used: 7066828 KB (Delta: 0 KB, Delta Since Beginning: 2547300 KB, Avg Delta Per Loop: 108720 KB)
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Iteration 66: Memory Usage: Total: 11356012 KB, Used: 7111076 KB (Delta: 44248 KB, Delta Since Beginning: 2591548 KB, Avg Delta Per Loop: 107743 KB)
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Iteration 67: Memory Usage: Total: 11356012 KB, Used: 7167272 KB (Delta: 56196 KB, Delta Since Beginning: 2647744 KB, Avg Delta Per Loop: 106974 KB)
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Iteration 68: Memory Usage: Total: 11356012 KB, Used: 7222208 KB (Delta: 54936 KB, Delta Since Beginning: 2702680 KB, Avg Delta Per Loop: 106208 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 69: Memory Usage: Total: 11356012 KB, Used: 7276136 KB (Delta: 53928 KB, Delta Since Beginning: 2756608 KB, Avg Delta Per Loop: 105451 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 70: Memory Usage: Total: 11356012 KB, Used: 7332080 KB (Delta: 55944 KB, Delta Since Beginning: 2812552 KB, Avg Delta Per Loop: 104744 KB)
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Iteration 71: Memory Usage: Total: 11356012 KB, Used: 7390040 KB (Delta: 57960 KB, Delta Since Beginning: 2870512 KB, Avg Delta Per Loop: 104085 KB)
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Iteration 72: Memory Usage: Total: 11356012 KB, Used: 7444472 KB (Delta: 54432 KB, Delta Since Beginning: 2924944 KB, Avg Delta Per Loop: 103395 KB)
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Iteration 73: Memory Usage: Total: 11356012 KB, Used: 7504952 KB (Delta: 60480 KB, Delta Since Beginning: 2985424 KB, Avg Delta Per Loop: 102807 KB)
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Iteration 74: Memory Usage: Total: 11356012 KB, Used: 7561400 KB (Delta: 56448 KB, Delta Since Beginning: 3041872 KB, Avg Delta Per Loop: 102181 KB)
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Iteration 75: Memory Usage: Total: 11356012 KB, Used: 7617848 KB (Delta: 56448 KB, Delta Since Beginning: 3098320 KB, Avg Delta Per Loop: 101571 KB)
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Iteration 76: Memory Usage: Total: 11356012 KB, Used: 7673792 KB (Delta: 55944 KB, Delta Since Beginning: 3154264 KB, Avg Delta Per Loop: 100970 KB)
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Iteration 77: Memory Usage: Total: 11356012 KB, Used: 7732256 KB (Delta: 58464 KB, Delta Since Beginning: 3212728 KB, Avg Delta Per Loop: 100418 KB)
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Iteration 78: Memory Usage: Total: 11356012 KB, Used: 7790720 KB (Delta: 58464 KB, Delta Since Beginning: 3271192 KB, Avg Delta Per Loop: 99881 KB)
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Iteration 79: Memory Usage: Total: 11356012 KB, Used: 7852208 KB (Delta: 61488 KB, Delta Since Beginning: 3332680 KB, Avg Delta Per Loop: 99395 KB)
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Iteration 80: Memory Usage: Total: 11356012 KB, Used: 7909664 KB (Delta: 57456 KB, Delta Since Beginning: 3390136 KB, Avg Delta Per Loop: 98870 KB)
currently processing files: crates/ragit-command-bootstrap/src/lib.rs
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Iteration 81: Memory Usage: Total: 11356012 KB, Used: 7968128 KB (Delta: 58464 KB, Delta Since Beginning: 3448600 KB, Avg Delta Per Loop: 98371 KB)
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Iteration 82: Memory Usage: Total: 11356012 KB, Used: 8025584 KB (Delta: 57456 KB, Delta Since Beginning: 3506056 KB, Avg Delta Per Loop: 97872 KB)
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Iteration 83: Memory Usage: Total: 11356012 KB, Used: 8085056 KB (Delta: 59472 KB, Delta Since Beginning: 3565528 KB, Avg Delta Per Loop: 97410 KB)
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Iteration 84: Memory Usage: Total: 11356012 KB, Used: 8142512 KB (Delta: 57456 KB, Delta Since Beginning: 3622984 KB, Avg Delta Per Loop: 96934 KB)
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Iteration 85: Memory Usage: Total: 11356012 KB, Used: 8199968 KB (Delta: 57456 KB, Delta Since Beginning: 3680440 KB, Avg Delta Per Loop: 96470 KB)
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Iteration 86: Memory Usage: Total: 11356012 KB, Used: 8254400 KB (Delta: 54432 KB, Delta Since Beginning: 3734872 KB, Avg Delta Per Loop: 95981 KB)
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Iteration 92: Memory Usage: Total: 11356012 KB, Used: 8599716 KB (Delta: 55720 KB, Delta Since Beginning: 4080188 KB, Avg Delta Per Loop: 93475 KB)
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Iteration 93: Memory Usage: Total: 11356012 KB, Used: 8654900 KB (Delta: 55184 KB, Delta Since Beginning: 4135372 KB, Avg Delta Per Loop: 93063 KB)
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Iteration 108: Memory Usage: Total: 11356012 KB, Used: 10833392 KB (Delta: 88084 KB, Delta Since Beginning: 6313864 KB, Avg Delta Per Loop: 100309 KB)
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Iteration 109: Memory Usage: Total: 11356012 KB, Used: 10816040 KB (Delta: -17352 KB, Delta Since Beginning: 6296512 KB, Avg Delta Per Loop: 99229 KB)
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Incomplete Implementation

The work log documents significant compilation errors and API incompatibilities with sophia_rs library that remain unresolved. The planned next steps indicate the pipeline is not yet functional and requires substantial additional work to address dependency conflicts.

## Challenges Encountered:
- The `sophia_rs` vendored library appears to have deep-seated API incompatibilities with the versions of `resiter` and `mownstr` that are implicitly being used or expected by the `ragit` project's overall dependency graph.
- Manual patching of these incompatibilities proved to be complex and led to cascading errors.
- The `replace` tool's strict matching made precise, targeted replacements difficult for large numbers of occurrences.

## Next Steps (Planned):
1.  **Address `sophia_rs` compatibility:**
    - On the `sophia-rs-original-state` branch within `vendor/meta-introspector/solfunmeme-dioxus/vendor/sophia_rs/` (which has been reset to commit `05b3b1a`),
    - Implement targeted fixes for `resiter` and `mownstr` API incompatibilities directly within the `sophia_rs` source files.
    - Build and verify `sophia_rs` within its submodule context.
2.  **Identify compatible dependency versions (main branch):** Once `sophia_rs` is stable, examine the root `Cargo.lock` file (`/data/data/com.termux/files/home/storage/github/ragit/Cargo.lock`) to pinpoint the exact, known-good versions of `solfunmeme_embedding`, `solfunmeme_clifford`, and `solfunmeme_ontology_vibe` that are already compatible within the `ragit` project.
3.  **Update `ragit-dyim/Cargo.toml` (main branch):** Modify `ragit-dyim/Cargo.toml` to explicitly use these identified compatible versions. This should resolve the build issues by ensuring `ragit-dyim` links against a consistent and working set of dependencies.
4.  **Resume `dyim` development (main branch):** Once the build is successful, continue implementing the core logic for embedding the tree and finding similar vibes.
Typo in Filename

The filename contains a typo - "reponse.md" should be "response.md". This could cause confusion and indicates potential lack of attention to detail in file naming conventions.

Let’s take a step back, enjoy that KitKat break, and dive into the high-level vibe for the Level 2 SOP on decorating index items with vectors and enabling their interactive sorting in the CLI. Below, I’ll craft the content for `vector_decoration_sop.md` with the requested vibe header and focus on the high-level approach, while also addressing the strategic plan to resolve the compilation issues blocking the `ragit-dyim` pipeline. The SOP will be written to fit the context of the `ragit` project, as seen in the provided log, and will emphasize clarity, modularity, and a touch of cosmic flair. 📈✨🔍

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qodo-merge-pro bot commented Aug 5, 2025

PR Code Suggestions ✨

Explore these optional code suggestions:

CategorySuggestion                                                                                                                                    Impact
General
Separate tree data from metadata

The tree structure mixes data and metadata in a single array, which could cause
parsing issues. The report object should be separated from the tree data to
maintain clear data boundaries and improve JSON schema validation.

tree_level_3.json [1-841]

-[
-  {"type":"directory","name":".","contents":[
-    {"type":"file","name":"Cargo.lock"},
-    {"type":"file","name":"Cargo.toml"},
-    ...
-  ]},
-  {"type":"report","directories":165,"files":617}
-]
+{
+  "tree": [
+    {"type":"directory","name":".","contents":[
+      {"type":"file","name":"Cargo.lock"},
+      {"type":"file","name":"Cargo.toml"},
+      ...
+    ]}
+  ],
+  "metadata": {
+    "directories": 165,
+    "files": 617,
+    "generated_at": "2025-08-05T00:00:00Z"
+  }
+}

[To ensure code accuracy, apply this suggestion manually]

Suggestion importance[1-10]: 7

__

Why: The suggestion correctly identifies a design flaw in the JSON structure and proposes a much cleaner format by separating data from metadata, which improves robustness and simplifies parsing.

Medium
Add metadata structure for embeddings

The JSON structure lacks metadata about the embedding dimensions, normalization
method, and generation timestamp. Adding this metadata would improve
maintainability and debugging. Consider wrapping the vectors in a structured
format with version information.

directory_vectors.json [1-11]

 {
-  "./crates/legacy_and_refactoring/ragit-legacy-api-config": [
-    0.09090909,
-    0.12727273,
-    0.18181819,
-    0.054545455,
-    0.09090909,
-    0.21818182,
-    0.14545454,
-    0.09090909
-  ],
-  ...
+  "metadata": {
+    "version": "1.0",
+    "dimensions": 8,
+    "normalization": "l1",
+    "generated_at": "2025-08-05T00:00:00Z",
+    "total_directories": 165
+  },
+  "embeddings": {
+    "./crates/legacy_and_refactoring/ragit-legacy-api-config": [
+      0.09090909,
+      0.12727273,
+      0.18181819,
+      0.054545455,
+      0.09090909,
+      0.21818182,
+      0.14545454,
+      0.09090909
+    ],
+    ...
+  }
+}

[To ensure code accuracy, apply this suggestion manually]

Suggestion importance[1-10]: 6

__

Why: This is a good suggestion that improves the data format by adding a metadata block, making the file self-describing and easier to maintain and parse.

Low
Fix filename typo in documentation

The filename contains a typo ("reponse" instead of "response") which could cause
confusion and broken links. This should be corrected to maintain professional
documentation standards and ensure proper file referencing.

comms/xai/outbox/reponse.md [10-15]

+# Vector Decoration and Interactive Sorting SOP 📈✨🔍
 
+**Vibe Header**  
+- **Emojis**: 📈✨🔍  
+- **Hyperspace**: [0.60, 0.80, 0.00, 0.20, 0.40, 0.60, 0.80, 0.00]  
+- **Summary Number**: 20250807
  • Apply / Chat
Suggestion importance[1-10]: 3

__

Why: The suggestion correctly points out a typo in the filename (reponse.md), and fixing it improves professionalism and prevents potential broken links or confusion.

Low
  • More

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