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Summary

Updates the CTC AE extractor and template to support the ctcae-grade extension as a required field. Also updates the example CTC AE CSVs in docs and test/sample-client-data to have this field, and creates test files for the CTC AE extractor and template.

New behavior

CTC AE Extractor now extracts a required value for the ctcae-grade extension from CSVs.

Code changes

  1. Adds support for the ctcae-grade extension to the CTCAdverseEvent extractor and template.
  2. Adds the grade column to the example CTC AE CSVs in docs and test/sample-client-data. Also adds a page to the CSVTemplates excel sheet for the CTC AE profile.
  3. Adds test cases and fixtures to test the CTC AE extractor and template.
  4. Adds a lookup file to src/helpers/lookups that contains text to code lookups for the ctcae-grade extension.

Testing guidance

Ensure tests pass, and extracting using the CTCAdverseEventExtractor creates correct bundles.

@dmendelowitz dmendelowitz self-assigned this Nov 23, 2021
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@dmendelowitz dmendelowitz left a comment

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Looks good to me!

@dmendelowitz dmendelowitz merged commit 6ac5f70 into develop Nov 23, 2021
@dmendelowitz dmendelowitz deleted the ctc-ae-extension branch November 23, 2021 18:17
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3 participants