• Add utility script NonpareilCurves.R

Solve overflow issues affecting conda builds

• Several bug fixes
• Fully reproducible results (with -r)
• Improvements in RAM handling
• Improvements in CLI defaults
• Safer random subsampling when -T kmer

Full Changelog: v3.5.2...v3.5.3

Safe gunzipping

Cleaner compilation and harmonized version numbers

Full Changelog: v3.5.0...v3.5.1

Support for gzipped sequence files

Adds informative error message on missing input file

Implements random seeds for alignment kernel and expands documentation

Solved an infinite loop for low-quality sequences

Solved a minor issue with @ksize headers for alignment kernel