chore: dependency updates

[sgammon]

Summary

General dependency updates.

• Dependencies
  • Update Crates
  • Update NPM libs
  • Update Micronaut platform → 4.9.1
  • Update Bun → 1.2.19
  • Update Commons I/O → 2.20.0
  • Update JLine → 3.30.4
  • Update Netty → 4.2.3.Final

[Copilot]

Pull Request Overview

This PR updates various dependencies across multiple package managers and build systems. The changes include version bumps for Kotlin library dependencies, Node.js packages, and Rust crate dependencies.

Key Changes

• Updated JVM dependencies including AtomicFU, GraalVM metadata, Netty, JLine, Commons I/O, and Micronaut
• Updated Node.js dependencies including Bun runtime, ESBuild, ESLint, and various supporting packages
• Updated Rust dependencies with new Git revision hashes for Oxc, UV, and Ruff

Reviewed Changes

Copilot reviewed 6 out of 7 changed files in this pull request and generated no comments.

Show a summary per file

File	Description
tools/elide-build/src/main/kotlin/elide/internal/conventions/Constants.kt	Updated version constants for AtomicFU, GraalVM metadata, Netty, and JLine
package.json	Updated ESBuild, Bun, and Bun types versions
package-lock.kdl	Updated lockfile entries for all Node.js dependency changes
gradle/elide.versions.toml	Updated version catalog entries for Commons I/O, GraalVM metadata, JLine, Micronaut, and Netty
config/bun-version	Updated Bun version from 1.2.18 to 1.2.19
Cargo.toml	Updated Git revision hashes for Oxc, UV, and Ruff dependencies

[socket-security]

Review the following changes in direct dependencies. Learn more about Socket for GitHub.

Diff	Package	Supply Chain Security	Vulnerability	Quality	Maintenance	License
	npm/​esbuild@​0.25.7 ⏵ 0.25.8	-9		-29	-6
	npm/​bun@​1.2.18 ⏵ 1.2.19
	npm/​bun-types@​1.2.18 ⏵ 1.2.19	+1		+18	+3

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[codecov]

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 39.83%. Comparing base (555631b) to head (e7affd2).
Report is 1 commits behind head on main.

Additional details and impacted files

@@           Coverage Diff           @@
##             main    #1577   +/-   ##
=======================================
  Coverage   39.83%   39.83%           
=======================================
  Files         769      769           
  Lines       37015    37015           
  Branches     5234     5234           
=======================================
  Hits        14746    14746           
  Misses      20500    20500           
  Partials     1769     1769           

Flag	Coverage Δ
jvm	39.83% <ø> (ø)
lib	39.83% <ø> (ø)

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