"Document doe not match the AST" error every time I try to refactor->rename a class

[IgorArnaut]

Steps to reproduce

1. Right click a Java file in Project Explorer
2. Choose Refactor and then Rename
3. Have "Update references" enabled
4. Change the name and click "Finish"
5. Get "Rename Compilation Unit" error

I expected the Java file, class and all its occurrences to be renamed, but I got this error. It happens every time I try to rename a Java class/file. I tried renaming AppUserLoginDTO to LoginDTO.

@Data
@Builder
public class AppUserLoginDTO {
    @NotBlank(message = "Imejl adresa je obavezna")
    @Email(message = "Imejl adresa mora biti u tačnom formatu")
    private String email;
    @NotBlank(message = "Lozinka je obavezna")
    private String password;
}

Here is some relevant log output

From <workspace>/.metadata/.log

!ENTRY org.eclipse.ltk.ui.refactoring 4 4 2025-08-13 22:56:53.318
!MESSAGE Document does not match the AST
!STACK 0
java.lang.IllegalArgumentException: Document does not match the AST
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.handleException(ASTRewriteAnalyzer.java:4973)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.visit(ASTRewriteAnalyzer.java:2585)
	at org.eclipse.jdt.core.dom.ReturnStatement.accept0(ReturnStatement.java:126)
	at org.eclipse.jdt.core.dom.ASTNode.accept(ASTNode.java:3312)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.doVisit(ASTRewriteAnalyzer.java:431)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.voidVisitList(ASTRewriteAnalyzer.java:469)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.voidVisit(ASTRewriteAnalyzer.java:463)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.doVisitUnchangedChildren(ASTRewriteAnalyzer.java:476)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.visit(ASTRewriteAnalyzer.java:2464)
	at org.eclipse.jdt.core.dom.Block.accept0(Block.java:126)
	at org.eclipse.jdt.core.dom.ASTNode.accept(ASTNode.java:3312)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.voidVisit(ASTRewriteAnalyzer.java:455)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.voidVisit(ASTRewriteAnalyzer.java:461)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.doVisitUnchangedChildren(ASTRewriteAnalyzer.java:476)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.visit(ASTRewriteAnalyzer.java:2370)
	at org.eclipse.jdt.core.dom.MethodDeclaration.accept0(MethodDeclaration.java:652)
	at org.eclipse.jdt.core.dom.ASTNode.accept(ASTNode.java:3312)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.doVisit(ASTRewriteAnalyzer.java:431)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.doVisitList(ASTRewriteAnalyzer.java:449)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.doVisit(ASTRewriteAnalyzer.java:440)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.rewriteParagraphList(ASTRewriteAnalyzer.java:1318)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.visit(ASTRewriteAnalyzer.java:2175)
	at org.eclipse.jdt.core.dom.TypeDeclaration.accept0(TypeDeclaration.java:480)
	at org.eclipse.jdt.core.dom.ASTNode.accept(ASTNode.java:3312)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.doVisit(ASTRewriteAnalyzer.java:431)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.voidVisitList(ASTRewriteAnalyzer.java:469)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.voidVisit(ASTRewriteAnalyzer.java:463)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.doVisitUnchangedChildren(ASTRewriteAnalyzer.java:476)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.visit(ASTRewriteAnalyzer.java:2006)
	at org.eclipse.jdt.core.dom.CompilationUnit.accept0(CompilationUnit.java:249)
	at org.eclipse.jdt.core.dom.ASTNode.accept(ASTNode.java:3312)
	at org.eclipse.jdt.core.dom.rewrite.ASTRewrite.internalRewriteAST(ASTRewrite.java:306)
	at org.eclipse.jdt.core.dom.rewrite.ASTRewrite.rewriteAST(ASTRewrite.java:295)
	at org.eclipse.jdt.internal.core.CopyResourceElementsOperation.updateContent(CopyResourceElementsOperation.java:657)
	at org.eclipse.jdt.internal.core.CopyResourceElementsOperation.processCompilationUnitResource(CopyResourceElementsOperation.java:323)
	at org.eclipse.jdt.internal.core.CopyResourceElementsOperation.processElement(CopyResourceElementsOperation.java:429)
	at org.eclipse.jdt.internal.core.MultiOperation.processElements(MultiOperation.java:175)
	at org.eclipse.jdt.internal.core.CopyResourceElementsOperation.processElements(CopyResourceElementsOperation.java:448)
	at org.eclipse.jdt.internal.core.MultiOperation.executeOperation(MultiOperation.java:102)
	at org.eclipse.jdt.internal.core.JavaModelOperation.run(JavaModelOperation.java:751)
	at org.eclipse.core.internal.resources.Workspace.run(Workspace.java:2457)
	at org.eclipse.core.internal.resources.Workspace.run(Workspace.java:2482)
	at org.eclipse.jdt.internal.core.JavaModelOperation.runOperation(JavaModelOperation.java:821)
	at org.eclipse.jdt.internal.core.JavaModel.rename(JavaModel.java:300)
	at org.eclipse.jdt.internal.core.CompilationUnit.rename(CompilationUnit.java:1452)
	at org.eclipse.jdt.internal.corext.refactoring.changes.RenameCompilationUnitChange.doRename(RenameCompilationUnitChange.java:65)
	at org.eclipse.jdt.internal.corext.refactoring.AbstractJavaElementRenameChange.perform(AbstractJavaElementRenameChange.java:93)
	at org.eclipse.ltk.core.refactoring.CompositeChange.perform(CompositeChange.java:278)
	at org.eclipse.jdt.internal.corext.refactoring.changes.DynamicValidationStateChange.access$0(DynamicValidationStateChange.java:1)
	at org.eclipse.jdt.internal.corext.refactoring.changes.DynamicValidationStateChange.lambda$0(DynamicValidationStateChange.java:105)
	at org.eclipse.jdt.internal.core.BatchOperation.executeOperation(BatchOperation.java:41)
	at org.eclipse.jdt.internal.core.JavaModelOperation.run(JavaModelOperation.java:751)
	at org.eclipse.core.internal.resources.Workspace.run(Workspace.java:2457)
	at org.eclipse.core.internal.resources.Workspace.run(Workspace.java:2482)
	at org.eclipse.jdt.core.JavaCore.run(JavaCore.java:6112)
	at org.eclipse.jdt.internal.corext.refactoring.changes.DynamicValidationStateChange.perform(DynamicValidationStateChange.java:106)
	at org.eclipse.ltk.core.refactoring.CompositeChange.perform(CompositeChange.java:278)
	at org.eclipse.ltk.core.refactoring.PerformChangeOperation.lambda$0(PerformChangeOperation.java:247)
	at org.eclipse.core.internal.resources.Workspace.run(Workspace.java:2457)
	at org.eclipse.core.internal.resources.Workspace.run(Workspace.java:2482)
	at org.eclipse.ltk.core.refactoring.PerformChangeOperation.executeChange(PerformChangeOperation.java:284)
	at org.eclipse.ltk.internal.ui.refactoring.UIPerformChangeOperation.executeChange(UIPerformChangeOperation.java:94)
	at org.eclipse.ltk.core.refactoring.PerformChangeOperation.run(PerformChangeOperation.java:210)
	at org.eclipse.core.internal.resources.Workspace.run(Workspace.java:2457)
	at org.eclipse.core.internal.resources.Workspace.run(Workspace.java:2482)
	at org.eclipse.ltk.internal.ui.refactoring.WorkbenchRunnableAdapter.run(WorkbenchRunnableAdapter.java:89)
	at org.eclipse.jface.operation.ModalContext$ModalContextThread.run(ModalContext.java:123)
Caused by: org.eclipse.core.runtime.CoreException: End Of File
	at org.eclipse.jdt.internal.core.dom.rewrite.TokenScanner.readNext(TokenScanner.java:95)
	at org.eclipse.jdt.internal.core.dom.rewrite.TokenScanner.readToToken(TokenScanner.java:152)
	at org.eclipse.jdt.internal.core.dom.rewrite.TokenScanner.readToToken(TokenScanner.java:165)
	at org.eclipse.jdt.internal.core.dom.rewrite.TokenScanner.getTokenEndOffset(TokenScanner.java:190)
	at org.eclipse.jdt.internal.core.dom.rewrite.ASTRewriteAnalyzer.visit(ASTRewriteAnalyzer.java:2575)
	... 65 more

Tested under this environment:

• OS & version: Windows 11 64-bit
• Eclipse IDE/Platform version (as shown in Help > About): 2025-06 (4.36.0)

[srikanth-sankaran]

@subyssurendran666 - can you investigate this please ? Reroute after triaging as needed, TIA

[ART515]

It occures to me as well.

Spring Tools for Eclipse Version: 4.31.0.RELEASE Build Id: 202506052058
Lombok 1.18.38 org.projectlombok.feature.feature.group

Let me know if you need more info if I have to try something to fix it.

[ART515]

It seems that when I rename an inner class there is no problem, but only when I want to rename the .java file.