Identifying non-coding variant effects at scale via machine learning models of cis-regulatory reporter assays
Preprint available at https://www.biorxiv.org/content/10.1101/2025.04.16.648420v1. MPAC predictions available at https://doi.org/10.5281/zenodo.15178434. See complementary repository https://github.com/john-c-butts/MPAC/ (Maintained by John Butts).
Contains contains code used to preprocess gnomAD predictions into intermediate files and summary tables. See README therein for details. Maintained by Mackenzie Noon.
Contains code used to analyze and visualize data related to the gnomAD and promoter saturation mutagenesis work. See README therein for details. Maintained by Stephen Rong.