ctsm5.4_5.3.068_PPEcal115_116_[AD, SASU, pSASU, HIST] #116
Description
Description:
Clone of #115 but with crop active, to create initial conditions on the ne30 grid for use in coupled model runs
Case directory:
Locally:
/glade/work/wwieder/ctsm5.3.0/ctsm5.4_5.3.068_PPEcal115_116_AD
./create_newcase --case /glade/work/wwieder/ctsm5.3.0/ctsm5.4_5.3.068_PPEcal115_116_AD --compset I1850Clm60BgcCropCrujra --res ne30pg3_t232 --run-unsupported
./create_clone --clone /glade/work/wwieder/ctsm5.3.0/ctsm5.4_5.3.068_PPEcal115_116_AD --case /glade/work/wwieder/ctsm5.3.0/ctsm5.4_5.3.068_PPEcal115_116_SASU --keepexe
./create_clone --clone /glade/work/wwieder/ctsm5.3.0/ctsm5.4_5.3.068_PPEcal115_116_SASU --case /glade/work/wwieder/ctsm5.3.0/ctsm5.4_5.3.068_PPEcal115_116_pSASU --keepexe
Sandbox:
Locally:
/glade/u/home/wwieder/CTSM/cime/scripts
created from alpha-ctsm5.4.CMIP7.08.ctsm5.3.068 branch
- AD
user_nl_ changes
paramfile='/glade/work/linnia/CLM6-PPE/ctsm6_cal/paramfiles/cal115_c08132025.nc'
hist_fincl1 = 'TOTECOSYSC', 'TOTECOSYSN', 'TOTSOMC', 'TOTSOMN', 'TOTVEGC', 'TOTVEGN', 'TLAI', 'GPP', 'CPOOL', 'NPP', 'TWS','H2OSNO'
xml changes
./xmlchange MOSART_MODE=NULL
./xmlchange STOP_N=40,STOP_OPTION=nyears
./xmlchange CLM_ACCELERATED_SPINUP=on,CLM_FORCE_COLDSTART=on
./xmlchange CONTINUE_RUN=FALSE,RESUBMIT=8
- SASU
- changed
NTASKS = -24for CPL and LND to increase throughput
./xmlchange MOSART_MODE=NULL
./xmlchange RUN_TYPE=hybrid
./xmlchange STOP_N=80,STOP_OPTION=nyears
./xmlchange CLM_ACCELERATED_SPINUP=sasu,CLM_FORCE_COLDSTART=off
./xmlchange CONTINUE_RUN=FALSE,RESUBMIT=3
./xmlchange GET_REFCASE=TRUE
./xmlchange RUN_REFCASE=ctsm5.4_5.3.068_PPEcal115_116_AD
./xmlchange RUN_REFDATE=0361-01-01
./xmlchange DRV_RESTART_POINTER=rpointer.cpl.0361-01-01-00000
./xmlchange RUN_REFDIR=/glade/derecho/scratch/wwieder/archive/ctsm5.4_5.3.068_PPEcal115_116_AD/rest/0361-01-01-00000
echo "paramfile='/glade/work/linnia/CLM6-PPE/ctsm6_cal/paramfiles/cal115_c08132025.nc'">> user_nl_clm
- pSASU
./xmlchange MOSART_MODE=NULL
./xmlchange STOP_N=80,STOP_OPTION=nyears,REST_N=40
./xmlchange CLM_ACCELERATED_SPINUP=off,CLM_FORCE_COLDSTART=off
./xmlchange CONTINUE_RUN=FALSE,RESUBMIT=1
./xmlchange RUN_TYPE=hybrid
./xmlchange GET_REFCASE=TRUE
./xmlchange RUN_REFDATE=0321-01-01
./xmlchange DRV_RESTART_POINTER=rpointer.cpl.0321-01-01-00000
./xmlchange RUN_REFCASE=ctsm5.4_5.3.068_PPEcal115_116_SASU
./xmlchange RUN_REFDIR=/glade/derecho/scratch/wwieder/archive/ctsm5.4_5.3.068_PPEcal115_116_SASU/rest/0321-01-01-00000
echo "paramfile='/glade/work/linnia/CLM6-PPE/ctsm6_cal/paramfiles/cal115_c08132025.nc'">> user_nl_clm
- HIST
user_nl_datm_streams
!! manually update datm_streams to get through 2023
co2tseries.20tr:year_last = 2024
co2tseries.20tr:datafiles = /glade/campaign/cesm/cesmdata/inputdata/atm/datm7/CO2/fco2_datm_globalSSP3-7.0_simyr_1750-2501_CMIP6_c201101.nc
presndep.hist:datafiles = /glade/campaign/cesm/cesmdata/inputdata/lnd/clm2/ndepdata/fndep_clm_SSP370_b.e21.BWSSP370cmip6.f09_g17.CMIP6-SSP3-7.0-WACCM.002_1849-2101_monthly_0.9x1.25_c211216.nc
presndep.hist:year_last = 2024
! No CMIP6 aero files?
! We'll just use default CMIP6 HIST files and cycle after 2014
!presaero.hist:datafiles = /glade/campaign/cesm/cesmdata/inputdata/atm/cam/chem/trop_mozart_aero/aero/aerosoldep_rcp4.5_monthly_1849-2104_0.9x1.25_c100407.nc
!presaero.hist:year_last = 2024
user_nl_clm
paramfile='/glade/work/linnia/CLM6-PPE/ctsm6_cal/paramfiles/cal115_c08132025.nc'
finidat = '/glade/derecho/scratch/wwieder/archive/ctsm5.4_5.3.068_PPEcal115_116_pSASU/rest/0161-01-01-00000/ctsm5.4_5.3.068_PPEcal115_116_pSASU.clm2.r.0161-01-01-00000.nc'
use_init_interp = .true.
init_interp_fill_missing_urban_with_HD = .true.
ndep_taxmode = 'extend'
! "Survivability" output
hist_dov2xy(1) = .true.
hist_dov2xy(2) = .false.
hist_fields_list_file = .false.
hist_fincl2 = 'TLAI', 'TSA', 'TREFMNAV', 'TREFMXAV', 'BTRANMN', 'Vcmx25Z', 'FSH', 'VEGWP', 'FCTR', 'FCEV', 'FGEV',
'FIRE', 'FSR', 'FIRA', 'FSA', 'GSSUNLN', 'GSSHALN', 'TSKIN', 'GPP', 'NPP', 'AGNPP', 'TOTVEGC',
'NPP_NUPTAKE', 'AR', 'HR', 'HTOP'
hist_mfilt(1) = 1
hist_mfilt(2) = 1
hist_nhtfrq(1) = 0
hist_nhtfrq(2) = 0
hist_type1d_pertape(1) = ' '
hist_type1d_pertape(2) = ' '
! Crop output
hist_dov2xy(3) = .false.
hist_mfilt(3) = 1
hist_nhtfrq(3) = -8760
hist_type1d_pertape(3) = ' '
hist_fincl3 = 'SDATES:I', 'SDATES_PERHARV:I', 'SYEARS_PERHARV:I', 'HDATES:I', 'GRAINC_TO_FOOD_PERHARV:I', 'GRAINC_TO_FOOD_ANN:I', 'GRAINN_TO_FOOD_PERHARV:I', 'GRAINN_TO_FOOD_ANN:I', 'GRAINC_TO_SEED_PERHARV:I', 'GRAINC_TO_SEED_ANN:I', 'GRAINN_TO_SEED_PERHARV:I', 'GRAINN_TO_SEED_ANN:I', 'HDATES:I', 'GDDHARV_PERHARV:I', 'GDDACCUM_PERHARV:I', 'HUI_PERHARV:I', 'SOWING_REASON_PERHARV:I', 'HARVEST_REASON_PERHARV:I', 'SWINDOW_STARTS:I', 'SWINDOW_ENDS:I', 'GDD20_BASELINE:I', 'GDD20_SEASON_START:I', 'GDD20_SEASON_END:I'
1850-1871
./xmlchange RUN_TYPE=startup
./xmlchange RUN_STARTDATE=1850-01-01
./xmlchange STOP_OPTION=nyears
./xmlchange STOP_N=21
./xmlchange CONTINUE_RUN=FALSE
./xmlchange RESUBMIT=0
./xmlchange DATM_YR_ALIGN=1901
./xmlchange DATM_YR_START=1901
./xmlchange DATM_YR_END=1920
1871-1901
./xmlchange STOP_N=30
./xmlchange CONTINUE_RUN=TRUE
1901-2023
./xmlchange STOP_N=31
./xmlchange DATM_YR_END=2023
./xmlchange RESUBMIT=3
./xmlchange DATM_SKIP_RESTART_READ=TRUE
SourceMods:
Diagnostics:
Diags (if available)
Output:
Output (if/when available):
/glade/derecho/scratch/wwieder/archive/ctsm5.4_5.3.068_PPEcal115_116_AD
Historical output now at:
/glade/campaign/cgd/tss/common/Land_Only_Simulations/CTSM54_DEV/ctsm5.4_5.3.068_PPEcal115_116_HIST
Restarts from AD, SASU, pSASU are at:
/glade/campaign/cgd/tss/people/oleson/CLM5_restarts/
Contacts:
@wwieder
Extra details:
AD startup 360 yrs, 1.85% disequilibrium w/ 97% by year 282
SASU hybrid 320 yrs, 18.38% disequilibrium
pSASU hybrid 160 yrs, 2.39% disequilibrium w/ 97% by year 101
hist 1850-2023
@olyson, @slevis-lmwg, @linniahawkins can you check this run is set up as we're expecting?