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2024-04-13-ner_deid_large_pipe_en #1125

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jsl-models and others added 30 commits December 21, 2023 17:33
@jsl-models
2023-12-21-bert_sequence_classifier_clinical_sections_en (#834)
a991c3a
@Cabir40
added missing files
dfde0eb
@jsl-models @Meryem1425
@akrztrk @bunyamin-polat
2024-01-08-ner_oncology_pipeline_en (#854)
e95a2b2 
* Add model 2024-01-08-ner_oncology_pipeline_en

* Add model 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en

* Add model 2024-01-09-oncology_diagnosis_pipeline_en

* Add model 2024-01-09-ner_posology_combined_langtest_en

* Delete docs/_posts/Meryem1425/2024-01-09-ner_posology_combined_langtest_en.md

* Update 2024-01-09-oncology_diagnosis_pipeline_en.md

* Update 2024-01-08-ner_oncology_pipeline_en.md

* Update 2024-01-09-oncology_diagnosis_pipeline_en.md

* Update 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en.md

* Add model 2024-01-10-medical_qa_biogpt_pipeline_en

* Update 2024-01-10-medical_qa_biogpt_pipeline_en.md

* Add model 2024-01-10-flan_t5_base_jsl_qa_pipeline_en

* Update 2024-01-10-flan_t5_base_jsl_qa_pipeline_en.md

* Add model 2024-01-10-ner_vop_pipeline_en

* Add model 2024-01-10-clinical_notes_qa_base_onnx_pipeline_en

* Update 2024-01-10-clinical_notes_qa_base_onnx_pipeline_en.md

* Update 2024-01-10-clinical_notes_qa_base_onnx_pipeline_en.md

* Update 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en.md

* Update 2024-01-10-clinical_notes_qa_base_onnx_pipeline_en.md

* Update 2024-01-10-flan_t5_base_jsl_qa_pipeline_en.md

* Update 2024-01-10-medical_qa_biogpt_pipeline_en.md

* Add model 2024-01-10-clinical_notes_qa_large_onnx_pipeline_en

* Update 2024-01-10-clinical_notes_qa_large_onnx_pipeline_en.md

* Add model 2024-01-10-clinical_deidentification_en

* Update 2024-01-10-clinical_deidentification_en.md

* Update 2024-01-10-clinical_deidentification_en.md

* Add model 2024-01-10-clinical_deidentification_langtest_en

* Update 2024-01-10-clinical_deidentification_langtest_en.md

---------

Co-authored-by: Meryem1425 <[email protected]>
Co-authored-by: Vildan <[email protected]>
Co-authored-by: Akar <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
@jsl-models @gokhanturer
@akrztrk @bunyamin-polat
2024-01-08-ner_oncology_pipeline_en (#855)
1fa64de 
* Add model 2024-01-08-ner_oncology_pipeline_en

* Add model 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en

* Add model 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en

* Add model 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en

* Add model 2024-01-09-oncology_diagnosis_pipeline_en

* Update 2024-01-09-oncology_diagnosis_pipeline_en.md

* Update 2024-01-08-ner_oncology_pipeline_en.md

* Delete docs/_posts/gokhanturer/2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en.md

* Add model 2024-01-10-ner_vop_pipeline_en

---------

Co-authored-by: gokhanturer <[email protected]>
Co-authored-by: Akar <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
@jsl-models @akrztrk @bunyamin-polat
2024-01-08-ner_oncology_pipeline_en (#856)
c8ee471 
* Add model 2024-01-08-ner_oncology_pipeline_en

* Add model 2024-01-09-oncology_diagnosis_pipeline_en

* Update 2024-01-09-oncology_diagnosis_pipeline_en.md

* Update 2024-01-08-ner_oncology_pipeline_en.md

* Add model 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en

* Update 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en.md

* Update 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en.md

* Add model 2024-01-09-medical_qa_biogpt_pipeline_en

* Update 2024-01-09-medical_qa_biogpt_pipeline_en.md

* Add model 2024-01-10-flan_t5_base_jsl_qa_pipeline_en

* Update 2024-01-10-flan_t5_base_jsl_qa_pipeline_en.md

* Add model 2024-01-10-ner_vop_pipeline_en

* Add model 2024-01-10-clinical_notes_qa_base_onnx_pipeline_en

* Update 2024-01-10-clinical_notes_qa_base_onnx_pipeline_en.md

* Update 2024-01-10-clinical_notes_qa_base_onnx_pipeline_en.md

* Update 2024-01-10-clinical_notes_qa_base_onnx_pipeline_en.md

* Update 2024-01-09-medical_qa_biogpt_pipeline_en.md

* Update 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en.md

* Update 2024-01-10-clinical_notes_qa_base_onnx_pipeline_en.md

* Update 2024-01-10-flan_t5_base_jsl_qa_pipeline_en.md

* Add model 2024-01-10-clinical_notes_qa_large_onnx_pipeline_en

* Update 2024-01-10-clinical_notes_qa_large_onnx_pipeline_en.md

* Add model 2024-01-10-clinical_deidentification_en

* Update 2024-01-10-clinical_deidentification_en.md

* Add model 2024-01-10-clinical_deidentification_langtest_en

* Update 2024-01-10-clinical_deidentification_langtest_en.md

---------

Co-authored-by: akrztrk <[email protected]>
Co-authored-by: Akar <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
@jsl-models @bunyamin-polat
2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en (#857)
41d7f3d 
* Add model 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en

* Update 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en.md

* Update 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en.md

* Add model 2024-01-10-medical_qa_biogpt_pipeline_en

* Update 2024-01-10-medical_qa_biogpt_pipeline_en.md

* Add model 2024-01-10-flan_t5_base_jsl_qa_pipeline_en

* Update 2024-01-10-flan_t5_base_jsl_qa_pipeline_en.md

* Update 2024-01-10-flan_t5_base_jsl_qa_pipeline_en.md

* Add model 2024-01-10-clinical_notes_qa_base_onnx_pipeline_en

* Update 2024-01-10-clinical_notes_qa_base_onnx_pipeline_en.md

* Update 2024-01-10-clinical_notes_qa_base_onnx_pipeline_en.md

* Update 2024-01-10-clinical_notes_qa_base_onnx_pipeline_en.md

* Update 2024-01-09-summarizer_clinical_laymen_onnx_pipeline_en.md

* Update 2024-01-10-flan_t5_base_jsl_qa_pipeline_en.md

* Update 2024-01-10-medical_qa_biogpt_pipeline_en.md

* Add model 2024-01-10-clinical_notes_qa_large_onnx_pipeline_en

* Update 2024-01-10-clinical_notes_qa_large_onnx_pipeline_en.md

* Update 2024-01-10-clinical_notes_qa_large_onnx_pipeline_en.md

* Add model 2024-01-10-clinical_deidentification_en

* Update 2024-01-10-clinical_deidentification_en.md

* Update 2024-01-10-clinical_deidentification_en.md

* Add model 2024-01-10-clinical_deidentification_langtest_en

* Update 2024-01-10-clinical_deidentification_langtest_en.md

* Update 2024-01-10-clinical_deidentification_langtest_en.md

---------

Co-authored-by: bunyamin-polat <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
@jsl-models
Add model 2024-01-11-ner_opioid_small_wip_en (#862)
f2726a2
@bunyamin-polat
Update 2024-01-10-medical_qa_biogpt_pipeline_en.md
d5804b0
@jsl-models @Ahmetemintek @muhammetsnts
2024-01-15-drug_parser_en (#866)
5239b83 
* Add model 2024-01-15-drug_parser_en

* Update 2024-01-15-drug_parser_en.md

* Update 2024-01-15-drug_parser_en.md

---------

Co-authored-by: Ahmetemintek <[email protected]>
Co-authored-by: muhammetsnts <[email protected]>
@jsl-models @akrztrk
@gpirge @bunyamin-polat @Cabir40
2024-01-16-explain_clinical_doc_vop_en (#875)
27fe65b 
* Add model 2024-01-16-explain_clinical_doc_vop_en

* Update 2024-01-16-explain_clinical_doc_vop_en.md

spark version 3.4.0

* Add model 2024-01-16-sbiobertresolve_snomed_bodyStructure_pipeline_en

* Update 2024-01-16-sbiobertresolve_snomed_bodyStructure_pipeline_en.md

* Add model 2024-01-17-sbiobertresolve_atc_pipeline_en

* Revert "Add model 2024-01-17-sbiobertresolve_atc_pipeline_en"

This reverts commit 6481c94.

* Delete docs/_posts/akrztrk/2024-01-16-sbiobertresolve_snomed_bodyStructure_pipeline_en.md

---------

Co-authored-by: akrztrk <[email protected]>
Co-authored-by: gursev.pirge <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
Co-authored-by: Cabir C <[email protected]>
@jsl-models @ahmet-mesut
@gpirge @bunyamin-polat @muhammetsnts @akrztrk
2024-01-16-explain_clinical_doc_vop_en (#874)
124ffb8 
* Add model 2024-01-16-explain_clinical_doc_vop_en

* Update 2024-01-16-explain_clinical_doc_vop_en.md

spark version 3.2.1

* Add model 2024-01-16-sbiobertresolve_snomed_bodyStructure_pipeline_en

* Update 2024-01-16-sbiobertresolve_snomed_bodyStructure_pipeline_en.md

* Add model 2024-01-17-sbiobertresolve_atc_pipeline_en

* Delete docs/_posts/ahmet-mesut/2024-01-16-sbiobertresolve_snomed_bodyStructure_pipeline_en.md

* Delete docs/_posts/ahmet-mesut/2024-01-17-sbiobertresolve_atc_pipeline_en.md

* Add model 2024-01-17-hcc_resolver_pipeline_en

* Add model 2024-01-17-atc_resolver_pipeline_en

* Update 2024-01-16-explain_clinical_doc_vop_en.md

* Update 2024-01-16-explain_clinical_doc_vop_en.md

* Update 2024-01-17-atc_resolver_pipeline_en.md

* Update 2024-01-17-atc_resolver_pipeline_en.md

* Update 2024-01-17-hcc_resolver_pipeline_en.md

* Update 2024-01-17-atc_resolver_pipeline_en.md

* Update 2024-01-17-atc_resolver_pipeline_en.md

* Update 2024-01-17-hcc_resolver_pipeline_en.md

* Add model 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en

* Update 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en.md

* Update 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en.md

* Update 2024-01-17-hcc_resolver_pipeline_en.md

* Update 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en.md

* Update 2024-01-17-hcc_resolver_pipeline_en.md

---------

Co-authored-by: ahmet-mesut <[email protected]>
Co-authored-by: gursev.pirge <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
Co-authored-by: muhammetsnts <[email protected]>
Co-authored-by: Akar <[email protected]>
@Cabir40
Update 2024-01-16-explain_clinical_doc_vop_en.md
020eb58
@jsl-models @Ahmetemintek @muhammetsnts
2024-01-17-sbiobertresolve_rxnorm_augmented_en (#878)
600fa58 
* Add model 2024-01-17-sbiobertresolve_rxnorm_augmented_en

* Update 2024-01-17-sbiobertresolve_rxnorm_augmented_en.md

---------

Co-authored-by: Ahmetemintek <[email protected]>
Co-authored-by: muhammetsnts <[email protected]>
@jsl-models @bunyamin-polat
@ahmet-mesut @SKocer @muhammetsnts @gpirge @akrztrk
2024-01-16-explain_clinical_doc_oncology_en (#873)
6d2aef9 
* Add model 2024-01-16-explain_clinical_doc_oncology_en

* Update 2024-01-16-explain_clinical_doc_oncology_en.md

* Add model 2024-01-16-explain_clinical_doc_generic_en

* Update 2024-01-16-explain_clinical_doc_generic_en.md

* Add model 2024-01-16-explain_clinical_doc_vop_en

* Update 2024-01-16-explain_clinical_doc_generic_en.md

* Update 2024-01-16-explain_clinical_doc_vop_en.md

explain_clinical_doc_vop - spark version: 3.0

* Update 2024-01-16-explain_clinical_doc_vop_en.md

* Update 2024-01-16-explain_clinical_doc_vop_en.md

Separate table for NERs added.

* Update 2024-01-16-explain_clinical_doc_vop_en.md

changed the sample results

* Add model 2024-01-16-sbiobertresolve_snomed_bodyStructure_pipeline_en

* Update 2024-01-16-sbiobertresolve_snomed_bodyStructure_pipeline_en.md

* Add model 2024-01-16-sbiobertresolve_snomed_findings_pipeline_en

* Update 2024-01-16-sbiobertresolve_snomed_findings_pipeline_en.md

* Update 2024-01-16-explain_clinical_doc_vop_en.md

modification in description

* Update 2024-01-16-explain_clinical_doc_oncology_en.md

* Add model 2024-01-17-sbiobertresolve_atc_pipeline_en

* Add model 2024-01-17-sbiobertresolve_hcc_augmented_pipeline_en

* Delete docs/_posts/bunyamin-polat/2024-01-17-sbiobertresolve_atc_pipeline_en.md

* Delete docs/_posts/bunyamin-polat/2024-01-17-sbiobertresolve_hcc_augmented_pipeline_en.md

* Add model 2024-01-17-hcc_resolver_pipeline_en

* Add model 2024-01-17-atc_resolver_pipeline_en

* Update 2024-01-16-explain_clinical_doc_vop_en.md

made changes in the description.

* Add model 2024-01-17-snomed_body_structure_resolver_pipeline_en

* Update 2024-01-17-snomed_body_structure_resolver_pipeline_en.md

* Delete docs/_posts/bunyamin-polat/2024-01-16-sbiobertresolve_snomed_bodyStructure_pipeline_en.md

* Delete docs/_posts/bunyamin-polat/2024-01-16-sbiobertresolve_snomed_findings_pipeline_en.md

* Update 2024-01-17-hcc_resolver_pipeline_en.md

* Add model 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en

* Update 2024-01-17-atc_resolver_pipeline_en.md

* Update 2024-01-16-explain_clinical_doc_generic_en.md

* Update 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en.md

* Update 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en.md

* Update 2024-01-17-snomed_body_structure_resolver_pipeline_en.md

* Update 2024-01-17-hcc_resolver_pipeline_en.md

* Add model 2024-01-17-snomed_findings_resolver_pipeline_en

* Update 2024-01-17-snomed_findings_resolver_pipeline_en.md

* Update 2024-01-17-snomed_findings_resolver_pipeline_en.md

* Update 2024-01-17-snomed_body_structure_resolver_pipeline_en.md

* Update 2024-01-17-snomed_findings_resolver_pipeline_en.md

* Update 2024-01-17-snomed_findings_resolver_pipeline_en.md

* Update 2024-01-16-explain_clinical_doc_oncology_en.md

* Update 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en.md

* Update 2024-01-17-atc_resolver_pipeline_en.md

* Update 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en.md

* Update 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en.md

* Update 2024-01-17-hcc_resolver_pipeline_en.md

* Update 2024-01-16-explain_clinical_doc_generic_en.md

* Update 2024-01-16-explain_clinical_doc_generic_en.md

* Update 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en.md

---------

Co-authored-by: bunyamin-polat <[email protected]>
Co-authored-by: Ahmet Mesut BİROL <[email protected]>
Co-authored-by: Samed K <[email protected]>
Co-authored-by: muhammetsnts <[email protected]>
Co-authored-by: gursev.pirge <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
Co-authored-by: Akar <[email protected]>
@jsl-models @akrztrk @bunyamin-polat
2024-01-17-hcc_resolver_pipeline_en (#876)
7bb292d 
* Add model 2024-01-17-hcc_resolver_pipeline_en

* Add model 2024-01-17-atc_resolver_pipeline_en

* Update 2024-01-17-hcc_resolver_pipeline_en.md

* Update 2024-01-17-atc_resolver_pipeline_en.md

* Update 2024-01-17-atc_resolver_pipeline_en.md

* Add model 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en

* Update 2024-01-17-hcc_resolver_pipeline_en.md

* Update 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en.md

* Update 2024-01-17-hcc_resolver_pipeline_en.md

* Add model 2024-01-17-snomed_body_structure_resolver_pipeline_en

* Update 2024-01-17-snomed_body_structure_resolver_pipeline_en.md

* Add model 2024-01-17-snomed_findings_resolver_pipeline_en

* Update 2024-01-17-snomed_findings_resolver_pipeline_en.md

* Update 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en.md

* Update 2024-01-17-atc_resolver_pipeline_en.md

* Update 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en.md

* Update 2024-01-17-hcc_resolver_pipeline_en.md

* Update 2024-01-17-cpt_procedures_measurements_resolver_pipeline_en.md

---------

Co-authored-by: akrztrk <[email protected]>
Co-authored-by: Akar <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
@jsl-models @akrztrk @bunyamin-polat
2024-01-17-snomed_procedures_measurements_resolver_pipeline_en (#879)
dbec17f 
* Add model 2024-01-17-snomed_procedures_measurements_resolver_pipeline_en

* Update 2024-01-17-snomed_procedures_measurements_resolver_pipeline_en.md

---------

Co-authored-by: akrztrk <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
@jsl-models @ahmet-mesut
@bunyamin-polat @SKocer
2024-01-17-snomed_body_structure_resolver_pipeline_en (#877)
afeda37 
* Add model 2024-01-17-snomed_body_structure_resolver_pipeline_en

* Update 2024-01-17-snomed_body_structure_resolver_pipeline_en.md

* Add model 2024-01-17-snomed_findings_resolver_pipeline_en

* Update 2024-01-17-snomed_findings_resolver_pipeline_en.md

* Update 2024-01-17-snomed_findings_resolver_pipeline_en.md

* Update 2024-01-17-snomed_findings_resolver_pipeline_en.md

* Add model 2024-01-17-explain_clinical_doc_generic_en

* Update 2024-01-17-explain_clinical_doc_generic_en.md

* Update 2024-01-17-explain_clinical_doc_generic_en.md

---------

Co-authored-by: ahmet-mesut <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
Co-authored-by: Samed K <[email protected]>
@jsl-models @akrztrk @SKocer
2024-01-17-explain_clinical_doc_generic_en (#880)
5ffcff1 
* Add model 2024-01-17-explain_clinical_doc_generic_en

* Update 2024-01-17-explain_clinical_doc_generic_en.md

---------

Co-authored-by: akrztrk <[email protected]>
Co-authored-by: Samed K <[email protected]>
@jsl-models @bunyamin-polat
2024-01-17-snomed_procedures_measurements_resolver_pipeline_en (#881)
afc0e00 
* Add model 2024-01-17-snomed_procedures_measurements_resolver_pipeline_en

* Update 2024-01-17-snomed_procedures_measurements_resolver_pipeline_en.md

---------

Co-authored-by: bunyamin-polat <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
@jsl-models @ahmet-mesut @bunyamin-polat
2024-01-17-snomed_procedures_measurements_resolver_pipeline_en (#882)
fd2bbed 
* Add model 2024-01-17-snomed_procedures_measurements_resolver_pipeline_en

* Update 2024-01-17-snomed_procedures_measurements_resolver_pipeline_en.md

---------

Co-authored-by: ahmet-mesut <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
@jsl-models @bunyamin-polat
2024-01-17-hpo_resolver_pipeline_en (#883)
4bbc8d7 
* Add model 2024-01-17-hpo_resolver_pipeline_en

* Add model 2024-01-17-ner_deid_name_multilingual_xx

* Update 2024-01-17-ner_deid_name_multilingual_xx.md

---------

Co-authored-by: bunyamin-polat <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
@Cabir40
removed drug_parser
fb300ce
@jsl-models @bunyamin-polat @ahmet-mesut
2024-01-17-explain_clinical_doc_radiology_en (#885)
709dbfa 
* Add model 2024-01-17-explain_clinical_doc_radiology_en

* Update 2024-01-17-explain_clinical_doc_radiology_en.md

* Update 2024-01-17-explain_clinical_doc_radiology_en.md

---------

Co-authored-by: bunyamin-polat <[email protected]>
Co-authored-by: Ahmet Mesut BİROL <[email protected]>
@jsl-models @akrztrk @ahmet-mesut
2024-01-18-hpo_resolver_pipeline_en (#887)
c071980 
* Add model 2024-01-18-hpo_resolver_pipeline_en

* Update 2024-01-18-hpo_resolver_pipeline_en.md

* Add model 2024-01-18-explain_clinical_doc_radiology_en

* Update 2024-01-18-explain_clinical_doc_radiology_en.md

* Add model 2024-01-18-explain_clinical_doc_oncology_en

* Update 2024-01-18-explain_clinical_doc_oncology_en.md

---------

Co-authored-by: akrztrk <[email protected]>
Co-authored-by: Akar <[email protected]>
Co-authored-by: Ahmet Mesut BİROL <[email protected]>
@jsl-models @ahmet-mesut @akrztrk
2024-01-18-hpo_resolver_pipeline_en (#886)
bb40125 
* Add model 2024-01-18-hpo_resolver_pipeline_en

* Update 2024-01-18-hpo_resolver_pipeline_en.md

* Add model 2024-01-18-explain_clinical_doc_radiology_en

* Update 2024-01-18-explain_clinical_doc_radiology_en.md

* Add model 2024-01-18-explain_clinical_doc_oncology_en

* Update 2024-01-18-explain_clinical_doc_oncology_en.md

---------

Co-authored-by: ahmet-mesut <[email protected]>
Co-authored-by: Akar <[email protected]>
Co-authored-by: Ahmet Mesut BİROL <[email protected]>
@jsl-models
Add model 2024-01-22-sbiobert_base_cased_mli_onnx_en (#899)
b26de15
@jsl-models @gpirge
2024-01-24-sbiobertresolve_snomed_findings_en (#905)
50e647b 
* Add model 2024-01-24-sbiobertresolve_snomed_findings_en

* Update 2024-01-24-sbiobertresolve_snomed_findings_en.md

made the necessary changes - spark nlp 5.2.1

---------

Co-authored-by: gpirge <[email protected]>
Co-authored-by: gursev.pirge <[email protected]>
@jsl-models @bunyamin-polat @akrztrk
2024-01-25-mesh_resolver_pipeline_en (#908)
9980d29 
* Add model 2024-01-25-mesh_resolver_pipeline_en

* Update 2024-01-25-mesh_resolver_pipeline_en.md

* Add model 2024-01-25-ndc_resolver_pipeline_en

* Update 2024-01-25-ndc_resolver_pipeline_en.md

* Add model 2024-01-25-ner_clinical_abbreviation_langtest_en

* Update 2024-01-25-ner_clinical_abbreviation_langtest_en.md

* Update 2024-01-25-ner_clinical_abbreviation_langtest_en.md

---------

Co-authored-by: bunyamin-polat <[email protected]>
Co-authored-by: Akar <[email protected]>
Co-authored-by: Bünyamin Polat <[email protected]>
@jsl-models @ahmet-mesut @akrztrk
2024-01-25-mesh_resolver_pipeline_en (#909)
f88db8a 
* Add model 2024-01-25-mesh_resolver_pipeline_en

* Update 2024-01-25-mesh_resolver_pipeline_en.md

* Update 2024-01-25-mesh_resolver_pipeline_en.md

* Add model 2024-01-25-ndc_resolver_pipeline_en

* Update 2024-01-25-ndc_resolver_pipeline_en.md

---------

Co-authored-by: ahmet-mesut <[email protected]>
Co-authored-by: Akar <[email protected]>
@jsl-models @akrztrk
2024-01-25-mesh_resolver_pipeline_en (#910)
c3ce88d 
* Add model 2024-01-25-mesh_resolver_pipeline_en

* Update 2024-01-25-mesh_resolver_pipeline_en.md

* Add model 2024-01-25-ndc_resolver_pipeline_en

* Update 2024-01-25-ndc_resolver_pipeline_en.md

---------

Co-authored-by: akrztrk <[email protected]>
Co-authored-by: Akar <[email protected]>
jsl-models and others added 20 commits March 26, 2024 16:08
@jsl-models
2024-03-25-explain_clinical_doc_risk_factors_en (#1079)
839db18
@jsl-models
2024-03-25-explain_clinical_doc_risk_factors_en (#1077)
ec28db3
@jsl-models @gokhanturer @ahmet-mesut
2024-03-26-clinical_deidentification_en (#1082)
3585ae7 
* Add model 2024-03-26-clinical_deidentification_en

* Update 2024-03-26-clinical_deidentification_en.md

* Update 2024-03-26-clinical_deidentification_en.md

---------

Co-authored-by: gokhanturer <[email protected]>
Co-authored-by: Ahmet Mesut BİROL <[email protected]>
@jsl-models @bugeki @muhammetsnts
2024-03-26-meddra_llt_resolver_pipeline_en (#1085)
ef077d9 
* Add model 2024-03-26-meddra_llt_resolver_pipeline_en

* Update 2024-03-26-meddra_llt_resolver_pipeline_en.md

* Add model 2024-03-26-meddra_pt_resolver_pipeline_en

* Update 2024-03-26-meddra_pt_resolver_pipeline_en.md

* Update 2024-03-26-meddra_llt_resolver_pipeline_en.md

* Update 2024-03-26-meddra_pt_resolver_pipeline_en.md

---------

Co-authored-by: bugeki <[email protected]>
Co-authored-by: bugra <[email protected]>
Co-authored-by: muhammetsnts <[email protected]>
@jsl-models @akrztrk
@Meryem1425 @muhammetsnts
2024-03-26-meddra_pt_resolver_pipeline_en (#1083)
dda1816 
* Add model 2024-03-26-meddra_pt_resolver_pipeline_en

* Update 2024-03-26-meddra_pt_resolver_pipeline_en.md

* Add model 2024-03-26-meddra_llt_resolver_pipeline_en

* Update 2024-03-26-meddra_llt_resolver_pipeline_en.md

* Update 2024-03-26-meddra_llt_resolver_pipeline_en.md

* Update 2024-03-26-meddra_pt_resolver_pipeline_en.md

* Update 2024-03-26-meddra_llt_resolver_pipeline_en.md

* Update 2024-03-26-meddra_pt_resolver_pipeline_en.md

---------

Co-authored-by: akrztrk <[email protected]>
Co-authored-by: Akar <[email protected]>
Co-authored-by: Vildan <[email protected]>
Co-authored-by: muhammetsnts <[email protected]>
@jsl-models @Meryem1425 @muhammetsnts
2024-03-26-meddra_pt_resolver_pipeline_en (#1084)
61c19ea 
* Add model 2024-03-26-meddra_pt_resolver_pipeline_en

* Update 2024-03-26-meddra_pt_resolver_pipeline_en.md

* Add model 2024-03-26-meddra_llt_resolver_pipeline_en

* Update 2024-03-26-meddra_llt_resolver_pipeline_en.md

* Update 2024-03-26-meddra_pt_resolver_pipeline_en.md

* Update 2024-03-26-meddra_llt_resolver_pipeline_en.md

* Update 2024-03-26-meddra_pt_resolver_pipeline_en.md

---------

Co-authored-by: Meryem1425 <[email protected]>
Co-authored-by: Vildan <[email protected]>
Co-authored-by: muhammetsnts <[email protected]>
@jsl-models
2024-03-27-clinical_deidentification_multi_mode_output_en (#1089)
b6d805d
@jsl-models
2024-03-27-clinical_deidentification_multi_mode_output_en (#1088)
831cdb0
@jsl-models
2024-03-26-clinical_deidentification_multi_mode_output_en (#1086)
ad10033
@jsl-models @Meryem1425
2024-03-27-ner_opioid_en (#1087)
3bb3e05 
* Add model 2024-03-27-ner_opioid_en

* Update 2024-03-27-ner_opioid_en.md

---------

Co-authored-by: Meryem1425 <[email protected]>
Co-authored-by: Vildan <[email protected]>
@jsl-models
2024-03-27-clinical_deidentification_en (#1090)
3ee3401
@jsl-models
2024-03-27-clinical_deidentification_en (#1091)
b90f73f
@Cabir40
Merge branch 'main' into models_hub_internal
294aec1
@jsl-models @akrztrk
@muhammetsnts @RakshitKhajuria
2024-03-28-meddra_hlt_pt_mapper_en (#1097)
fff0089 
* Add model 2024-03-28-meddra_hlt_pt_mapper_en

* Add model 2024-03-28-meddra_pt_hlt_mapper_en

* Update 2024-03-28-meddra_hlt_pt_mapper_en.md

* Update 2024-03-28-meddra_pt_hlt_mapper_en.md

* Update 2024-03-28-meddra_pt_hlt_mapper_en.md

* Update 2024-03-28-meddra_pt_hlt_mapper_en.md

* Update 2024-03-28-meddra_hlt_pt_mapper_en.md

* Add model 2024-03-28-ner_profiling_deidentification_en

* Bump sparknlp version

* Shorten included models and fix typo

---------

Co-authored-by: akrztrk <[email protected]>
Co-authored-by: Akar <[email protected]>
Co-authored-by: muhammetsnts <[email protected]>
Co-authored-by: Rakshit Khajuria <[email protected]>
@akrztrk
Update 2024-03-28-meddra_hlt_pt_mapper_en.md
dd28c50
@akrztrk
Update 2024-03-28-meddra_pt_hlt_mapper_en.md
c49fe58
@jsl-models
2024-03-28-ner_profiling_deidentification_en (#1099)
5399ddd
@jsl-models
2024-03-28-ner_profiling_deidentification_en (#1100)
869f043
@jsl-models @Meryem1425
2024-04-08-ner_sdoh_core_en (#1112)
4d74c84 
* Add model 2024-04-08-ner_sdoh_core_en

* Update 2024-04-08-ner_sdoh_core_en.md

* Update 2024-04-08-ner_sdoh_core_en.md

---------

Co-authored-by: Meryem1425 <[email protected]>
Co-authored-by: Vildan <[email protected]>
@gadde5300
Add model 2024-04-13-ner_deid_large_pipe_en
49f4136
@gadde5300 gadde5300 requested a review from C-K-Loan April 13, 2024 22:06
@gadde5300 gadde5300 closed this Apr 13, 2024
@gadde5300 gadde5300 deleted the 2024-04-13-ner_deid_large_pipe_en_xYZmfvjcYSOpd9aKVi03W3aP branch April 13, 2024 22:16
@gadde5300 gadde5300 restored the 2024-04-13-ner_deid_large_pipe_en_xYZmfvjcYSOpd9aKVi03W3aP branch April 13, 2024 22:19
@gadde5300 gadde5300 reopened this Apr 13, 2024
Base automatically changed from models_hub_internal to main May 2, 2025 17:31
@mehmetbutgul
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Closing this PR as it has been stale for a long time.

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@jsl-models @mehmetbutgul @vkocaman @gadde5300 @Cabir40 @bunyamin-polat @muhammetsnts @akrztrk @ahmet-mesut @Meryem1425