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download spliceai_scores.raw.snv.hg38.vcf.gz trouble

Status: Open.

#166 In Illumina/SpliceAI;

· YYshen07 opened on Oct 17, 2025

how to understand “left-align indels”

Status: Open.

#165 In Illumina/SpliceAI;

· raobin1218 opened on Aug 14, 2025

Annotation of d Files Generated by CTAT Splicing

Status: Open.

#162 In Illumina/SpliceAI;

· km-2021 opened on Jun 3, 2025

Deprecation warning: Loading egg is deprecated and will be blocked in pip 25.1

Status: Open.

#161 In Illumina/SpliceAI;

· BenjaminDEMAILLE opened on May 4, 2025

Why ##reference=GRCh37/hg19 is added when working with GRCh38

Status: Open.

#160 In Illumina/SpliceAI;

· Manuel-DominguezCBG opened on Apr 24, 2025

CUDA Error

Status: Open.

#158 In Illumina/SpliceAI;

· beyza-kurtoglu opened on Mar 26, 2025

Implementations of models for 80nt, 400nt and 2K context

Status: Open.

#157 In Illumina/SpliceAI;

· qxdu opened on Feb 18, 2025

SpliceAI run time is too long

Status: Open.

#156 In Illumina/SpliceAI;

· Roshanshafiha opened on Feb 13, 2025

I failed to reproduce SpliceAI training based on the source code.

Status: Open.

#155 In Illumina/SpliceAI;

· shiro-kur opened on Jan 29, 2025

Variant present in SpliceAI lookup absent in spliceai_scores.masked.snv.hg19.vcf.gz

Status: Open.

#154 In Illumina/SpliceAI;

· Roshanshafiha opened on Jan 26, 2025

Help with scoring custom sequence

Status: Open.

#153 In Illumina/SpliceAI;

· albustruong opened on Jan 9, 2025

Mask not computed correctly. Possible off-by-1 error?

Status: Open.

#152 In Illumina/SpliceAI;

· bw2 opened on Nov 4, 2024