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Dear ZeroCostDL4Mic-Team,
After mailing with Esti this summer about contributing a 1D U-Net notebook, I finally came around to finish the notebook and create the pull request. As Esti requested, I added the notebook under Beta notebooks. I saw that you simplified the requirements.txt files, but I left it as it is produced from the notebook for now.

Some special implementations in this notebook which might not be found in the other U-Net notebooks:

  • download helper for published connected datasets (published simulations for train, test, and validation, published applied data for model application, published models)
  • in-notebook simulation of training, testing, and validation data
  • model tracking and loading via mlflow
  • improved PDF reports for training and evaluation
  • FCS-specific functionality (section 6) with implementations of the correction functions from our connected preprint

Please let me know what you think - I am happy to receive your feedback!

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