grdimage shading fails for xarray input #364
Description
Description of the problem
Passing shading=True in a simple fig.grdimage() call produces an error if the input grid is an xarray.DataArray. The error does not appear when I use the special "@" filename.
Full code that generated the error
import pygmt
fig = pygmt.Figure()
dem = pygmt.datasets.load_earth_relief('10m')
fig.grdimage(dem, region=[-180, 180, -90, 90], frame='af',
projection='Cyl_stere/6i', cmap='geo', shading=True)
fig.show(method='external')This works, though:
import pygmt
fig = pygmt.Figure()
fig.grdimage('@earth_relief_10m', region=[-180, 180, -90, 90], frame='af',
projection='Cyl_stere/6i', cmap='geo', shading=True)
fig.show(method='external')Error message summary
grdimage [ERROR]: Passing max <= zmin prevents automatic CPT generation!
grdimage [ERROR]: Failed to read CPT geo.
Full error message (debug verbosity)
grdimage [DEBUG]: Map distance calculation will be using great circle approximation with authalic auxiliary latitudes and authalic (R_2) radius = 6371007.1809 m, in meter.
grdimage [DEBUG]: Look for file -180/180/-90/90 in /Users/liamtoney/.gmt
grdimage [DEBUG]: Look for file -180/180/-90/90 in /Users/liamtoney/.gmt/cache
grdimage [DEBUG]: Look for file -180/180/-90/90 in /Users/liamtoney/.gmt/server
grdimage [DEBUG]: Look for file -180/180/-90/90 in /Users/liamtoney/.gmt/server/srtm1
grdimage [DEBUG]: Look for file -180/180/-90/90 in /Users/liamtoney/.gmt/server/srtm3
grdimage [DEBUG]: Got regular w/e/s/n for region (-180/180/-90/90)
grdimage [DEBUG]: Look for file geo in /Users/liamtoney/.gmt
grdimage [DEBUG]: Look for file geo in /Users/liamtoney/.gmt/cache
grdimage [DEBUG]: Look for file geo in /Users/liamtoney/.gmt/server
grdimage [DEBUG]: Look for file geo in /Users/liamtoney/.gmt/server/srtm1
grdimage [DEBUG]: Look for file geo in /Users/liamtoney/.gmt/server/srtm3
grdimage [DEBUG]: Look for file @GMTAPI@-000000 in /Users/liamtoney/.gmt
grdimage [DEBUG]: Look for file @GMTAPI@-000000 in /Users/liamtoney/.gmt/cache
grdimage [DEBUG]: Look for file @GMTAPI@-000000 in /Users/liamtoney/.gmt/server
grdimage [DEBUG]: Look for file @GMTAPI@-000000 in /Users/liamtoney/.gmt/server/srtm1
grdimage [DEBUG]: Look for file @GMTAPI@-000000 in /Users/liamtoney/.gmt/server/srtm3
grdimage [INFORMATION]: Read header from file @GMTAPI@-000000
grdimage [DEBUG]: Local file /Users/liamtoney/.gmt/server/gmt_hash_server.txt found
grdimage [DEBUG]: File /Users/liamtoney/.gmt/server/gmt_hash_server.txt less than 24 hours old, refresh is premature.
grdimage [DEBUG]: api_begin_io: Input resource access is now enabled [container]
grdimage [DEBUG]: api_import_grid: Passed ID = 0 and mode = 1
grdimage [DEBUG]: Grid/Image dimensions imply w/e/s/n = -180/180/-90/90, inc = 0.166667/0.166667, gridline registration, n_layers = 1
grdimage [DEBUG]: Geographic input grid, longitudes span exactly 360
grdimage [INFORMATION]: Given domain implies x_inc = 0.166667
grdimage [INFORMATION]: Given domain implies y_inc = 0.166667
grdimage [DEBUG]: Grid is considered to have a 360-degree longitude range.
grdimage [DEBUG]: Chosen boundary condition for all edges: geographic
grdimage [DEBUG]: Geographic input grid, longitudes span exactly 360
grdimage [DEBUG]: Object ID 1 : Registered Grid Memory Reference 7fc1ced29590 as an Input resource with geometry Surface [n_objects = 2]
grdimage [DEBUG]: Successfully created a new Grid container
grdimage [DEBUG]: GMT_End_IO: Input resource access is now disabled
grdimage [WARNING]: Spherical approximation used!
grdimage [WARNING]: Central meridian not given, default to 0
grdimage [DEBUG]: Projected values in meters: -2.00151e+07 2.00151e+07 -1.2742e+07 1.2742e+07
grdimage [DEBUG]: Auto-frame interval for axis 0 item 0: d = 60 f = 15
grdimage [INFORMATION]: Auto-frame interval for x-axis (item 0): a60f15
grdimage [DEBUG]: Auto-frame interval for axis 1 item 0: d = 60 f = 15
grdimage [INFORMATION]: Auto-frame interval for y-axis (item 0): a60f15
grdimage [INFORMATION]: Map scale is 2626.65 km per cm or 1:2.62665e+08.
grdimage [DEBUG]: Projected grid is non-orthogonal, nonlinear, or dpi was changed
grdimage [INFORMATION]: Derive intensity grid from data grid
grdimage [DEBUG]: Object ID 2 : Registered Grid Memory Copy 7fc1cec5a210 as an Output resource with geometry Surface [n_objects = 3]
grdimage [DEBUG]: Successfully created a new Grid container
grdimage [INFORMATION]: Calling grdgradient with args -G@GMTAPI@-000002 -A-45.0 -Nt1 -R-180/180/-90/90 --GMT_HISTORY=false @GMTAPI@-000000
grdimage [DEBUG]: GMT now running in modern mode [Session ID = 9323]
grdimage (gmtlib_free_tmp_arrays): tried to free unallocated memory
grdgradient [DEBUG]: History: Process -R-180/180/-90/90
grdgradient [DEBUG]: Look for file -180/180/-90/90 in /Users/liamtoney/.gmt
grdgradient [DEBUG]: Look for file -180/180/-90/90 in /Users/liamtoney/.gmt/cache
grdgradient [DEBUG]: Look for file -180/180/-90/90 in /Users/liamtoney/.gmt/server
grdgradient [DEBUG]: Look for file -180/180/-90/90 in /Users/liamtoney/.gmt/server/srtm1
grdgradient [DEBUG]: Look for file -180/180/-90/90 in /Users/liamtoney/.gmt/server/srtm3
grdgradient [DEBUG]: Got regular w/e/s/n for region (-180/180/-90/90)
grdgradient [DEBUG]: Look for file -45.0 in /Users/liamtoney/.gmt
grdgradient [DEBUG]: Look for file -45.0 in /Users/liamtoney/.gmt/cache
grdgradient [DEBUG]: Look for file -45.0 in /Users/liamtoney/.gmt/server
grdgradient [DEBUG]: Look for file -45.0 in /Users/liamtoney/.gmt/server/srtm1
grdgradient [DEBUG]: Look for file -45.0 in /Users/liamtoney/.gmt/server/srtm3
grdgradient [DEBUG]: amplitude_set = Y offset_set = N sigma_set = N
grdgradient [INFORMATION]: Processing input grid
grdgradient [DEBUG]: api_begin_io: Input resource access is now enabled [container]
grdgradient [DEBUG]: api_import_grid: Passed ID = 0 and mode = 1
grdgradient [DEBUG]: Grid/Image dimensions imply w/e/s/n = -180/180/-90/90, inc = 0.166667/0.166667, gridline registration, n_layers = 1
grdgradient [DEBUG]: Geographic input grid, longitudes span exactly 360
grdgradient [INFORMATION]: Given domain implies x_inc = 0.166667
grdgradient [INFORMATION]: Given domain implies y_inc = 0.166667
grdgradient [DEBUG]: Grid is considered to have a 360-degree longitude range.
grdgradient [DEBUG]: Chosen boundary condition for all edges: geographic
grdgradient [DEBUG]: Geographic input grid, longitudes span exactly 360
grdgradient [DEBUG]: Object ID 3 : Registered Grid Memory Reference 7fc1cc5eb9f0 as an Input resource with geometry Surface [n_objects = 4]
grdgradient [DEBUG]: Successfully created a new Grid container
grdgradient [DEBUG]: GMT_End_IO: Input resource access is now disabled
grdgradient [DEBUG]: api_begin_io: Input resource access is now enabled [container]
grdgradient [DEBUG]: api_import_grid: Passed ID = 0 and mode = 2
grdgradient [INFORMATION]: Importing grid data from user memory location
grdgradient [DEBUG]: Grid is considered to have a 360-degree longitude range.
grdgradient [DEBUG]: Chosen boundary condition for all edges: geographic
grdgradient [INFORMATION]: Set boundary condition for top edge: geographic
grdgradient [INFORMATION]: Set boundary condition for bottom edge: geographic
grdgradient [DEBUG]: GMT_End_IO: Input resource access is now disabled
grdgradient [DEBUG]: Object ID 4 : Registered Grid Memory Reference 7fc1cc5d3850 as an Input resource with geometry Surface [n_objects = 5]
grdgradient [DEBUG]: Successfully duplicated a Grid
grdgradient [INFORMATION]: Min Mean Max sigma intensities:
grdgradient [INFORMATION]: -0.35723270421 0.000249671630837 0.283594327547 0.0132078509689
grdgradient [DEBUG]: GMT_Write_Data: Writing Grid to memory object 2 from object 4 which transfers ownership
grdgradient [DEBUG]: api_begin_io: Output resource access is now enabled [container]
grdgradient [DEBUG]: api_export_data: Messenger dummy output container for object 2 [item 2] freed and set resource=data=NULL
grdgradient [DEBUG]: api_export_grid: Passed ID = 2 and mode = 0
grdgradient [INFORMATION]: Referencing grid data to GMT_GRID memory location
grdgradient [DEBUG]: GMT_End_IO: Output resource access is now disabled
grdgradient [DEBUG]: gmtapi_garbage_collection: Destroying object: C=0 A=0 ID=3 W=Input F=Grid M=Memory Copy S=Used P=7fc1cc5eb9f0 N=(null)
grdgradient [DEBUG]: GMTAPI_Garbage_Collection freed 1 memory objects
grdgradient [DEBUG]: gmtapi_unregister_io: Unregistering object no 3 [n_objects = 4]
grdgradient [DEBUG]: gmtapi_unregister_io: Unregistering object no 4 [n_objects = 3]
grdgradient (gmtlib_free_tmp_arrays): tried to free unallocated memory
grdimage [DEBUG]: Running in PS mode modern
grdimage [DEBUG]: Use PS filename /Users/liamtoney/.gmt/sessions/gmt6.9323/gmt_8.ps-
grdimage [DEBUG]: Create hidden PS file /Users/liamtoney/.gmt/sessions/gmt6.9323/gmt_8.ps-
grdimage [DEBUG]: Got session name as pygmt-session and default graphics formats as pdf
grdimage [INFORMATION]: Allocate and read data from file @GMTAPI@-000000
grdimage [DEBUG]: api_begin_io: Input resource access is now enabled [container]
grdimage [DEBUG]: api_import_grid: Passed ID = 1 and mode = 2
grdimage [INFORMATION]: Duplicating grid data from GMT_GRID memory location
grdimage [DEBUG]: GMT_End_IO: Input resource access is now disabled
grdimage [INFORMATION]: Allocates memory and read intensity file
grdimage [INFORMATION]: project grid files
grdimage [DEBUG]: Object ID 5 : Registered Grid Memory Reference 7fc1cc765be0 as an Input resource with geometry Surface [n_objects = 4]
grdimage [DEBUG]: Successfully duplicated a Grid
grdimage [DEBUG]: gmt_project_init: IN: Inc [0/0] n_columns/n_rows [2161/1081] dpi = 0 offset = 0
grdimage [DEBUG]: gmt_project_init: OUT: Inc [0/0] n_columns/n_rows [2161/1081] dpi = 0 offset = 0
grdimage [INFORMATION]: Grid projection from size 2161x1081 to 2161x1081
grdimage [DEBUG]: Successfully added data array to previously registered Grid container
grdimage [DEBUG]: gmt_grd_project: In [-180/180/-90/90] and out [0/6/0/3.81971863421]
grdimage [DEBUG]: GMT_Destroy_Data: freed memory for a Grid for object 1
grdimage [DEBUG]: gmtapi_unregister_io: Unregistering object no 1 [n_objects = 3]
grdimage [DEBUG]: gmtapi_unregister_io: Object no 1 has non-NULL resource pointer
grdimage [DEBUG]: Object ID 6 : Registered Grid Memory Reference 7fc1cc73a3e0 as an Input resource with geometry Surface [n_objects = 4]
grdimage [DEBUG]: Successfully duplicated a Grid
grdimage [DEBUG]: gmt_project_init: IN: Inc [0/0] n_columns/n_rows [2161/1081] dpi = 0 offset = 0
grdimage [DEBUG]: gmt_project_init: OUT: Inc [0/0] n_columns/n_rows [2161/1081] dpi = 0 offset = 0
grdimage [INFORMATION]: Grid projection from size 2161x1081 to 2161x1081
grdimage [DEBUG]: Successfully added data array to previously registered Grid container
grdimage [DEBUG]: gmt_grd_project: In [-180/180/-90/90] and out [0/6/0/3.81971863421]
grdimage [WARNING]: gmt_grd_project: Output grid extrema [-1.89669/1.87961] exceed extrema of input grid [-0.97649/0.970346] due to resampling
grdimage [WARNING]: gmt_grd_project: Output grid clipped to input grid extrema
grdimage [DEBUG]: GMT_Destroy_Data: freed memory for a Grid for object 2
grdimage [DEBUG]: gmtapi_unregister_io: Unregistering object no 2 [n_objects = 3]
grdimage [DEBUG]: gmtapi_unregister_io: Object no 2 has non-NULL resource pointer
grdimage [INFORMATION]: Given grid header, select default CPT to be turbo
grdimage [DEBUG]: Look for file geo in /Users/liamtoney/.gmt
grdimage [DEBUG]: Look for file geo in /Users/liamtoney/.gmt/cache
grdimage [DEBUG]: Look for file geo in /Users/liamtoney/.gmt/server
grdimage [DEBUG]: Look for file geo in /Users/liamtoney/.gmt/server/srtm1
grdimage [DEBUG]: Look for file geo in /Users/liamtoney/.gmt/server/srtm3
grdimage [ERROR]: Passing max <= zmin prevents automatic CPT generation!
grdimage [ERROR]: Failed to read CPT geo.
grdimage [DEBUG]: gmtapi_garbage_collection: Destroying object: C=0 A=0 ID=5 W=Input F=Grid M=Memory Reference S=Unused P=7fc1cc765be0 N=(null)
grdimage [DEBUG]: gmtapi_garbage_collection: Destroying object: C=0 A=0 ID=6 W=Input F=Grid M=Memory Reference S=Unused P=7fc1cc73a3e0 N=(null)
grdimage [DEBUG]: GMTAPI_Garbage_Collection freed 2 memory objects
grdimage [DEBUG]: gmtapi_unregister_io: Unregistering object no 5 [n_objects = 2]
grdimage [DEBUG]: gmtapi_unregister_io: Unregistering object no 6 [n_objects = 1]
grdimage (gmtlib_free_tmp_arrays): tried to free unallocated memory
Error: /syntaxerror in --%ztokenexec_continue--
Operand stack:
PSL_draw_path_lines
Execution stack:
%interp_exit .runexec2 --nostringval-- --nostringval-- --nostringval-- 2 %stopped_push --nostringval-- --nostringval-- --nostringval-- false 1 %stopped_push 1999 1 3 %oparray_pop 1998 1 3 %oparray_pop 1982 1 3 %oparray_pop 1868 1 3 %oparray_pop --nostringval-- %errorexec_pop .runexec2 --nostringval-- --nostringval-- --nostringval-- 2 %stopped_push --nostringval--
Dictionary stack:
--dict:981/1684(ro)(G)-- --dict:0/20(G)-- --dict:78/200(L)-- --dict:136/250(L)--
Current allocation mode is local
Last OS error: No such file or directory
psconvert [ERROR]: System call [gs -q -dSAFER -dNOPAUSE -dBATCH -sDEVICE=bbox -DPSL_no_pagefill -dMaxBitmap=2147483647 -dUseFastColor=true '/Users/liamtoney/.gmt/sessions/gmt6.9323/gmt_8.ps-' 2> '/Users/liamtoney/.gmt/sessions/gmt6.9323/psconvert_9323c.bb'] returned error 256.
---------------------------------------------------------------------------
GMTCLibError Traceback (most recent call last)
<ipython-input-21-0836d05457e7> in <module>
8 projection='Cyl_stere/6i', cmap='geo', shading=True, V='d')
9
---> 10 fig.show(method='external')
~/repos/pygmt/pygmt/figure.py in show(self, dpi, width, method)
265 raise GMTInvalidInput("Invalid show method '{}'.".format(method))
266 if method == "external":
--> 267 pdf = self._preview(fmt="pdf", dpi=dpi, anti_alias=False, as_bytes=False)
268 launch_external_viewer(pdf)
269 img = None
~/repos/pygmt/pygmt/figure.py in _preview(self, fmt, dpi, as_bytes, **kwargs)
340 """
341 fname = os.path.join(self._preview_dir.name, "{}.{}".format(self._name, fmt))
--> 342 self.savefig(fname, dpi=dpi, **kwargs)
343 if as_bytes:
344 with open(fname, "rb") as image:
~/repos/pygmt/pygmt/figure.py in savefig(self, fname, transparent, crop, anti_alias, show, **kwargs)
223 kwargs["W"] = "+k"
224
--> 225 self.psconvert(prefix=prefix, fmt=fmt, crop=crop, **kwargs)
226 if show:
227 launch_external_viewer(fname)
~/repos/pygmt/pygmt/helpers/decorators.py in new_module(*args, **kwargs)
181 if alias in kwargs:
182 kwargs[arg] = kwargs.pop(alias)
--> 183 return module_func(*args, **kwargs)
184
185 new_module.aliases = aliases
~/repos/pygmt/pygmt/helpers/decorators.py in new_module(*args, **kwargs)
289 )
290 # Execute the original function and return its output
--> 291 return module_func(*args, **kwargs)
292
293 return new_module
~/repos/pygmt/pygmt/figure.py in psconvert(self, **kwargs)
163 kwargs["A"] = ""
164 with Session() as lib:
--> 165 lib.call_module("psconvert", build_arg_string(kwargs))
166
167 def savefig(
~/repos/pygmt/pygmt/clib/session.py in call_module(self, module, args)
487 raise GMTCLibError(
488 "Module '{}' failed with status code {}:\n{}".format(
--> 489 module, status, self._error_message
490 )
491 )
GMTCLibError: Module 'psconvert' failed with status code 78:
psconvert [ERROR]: System call [gs -q -dSAFER -dNOPAUSE -dBATCH -sDEVICE=bbox -DPSL_no_pagefill -dMaxBitmap=2147483647 -dUseFastColor=true '/Users/liamtoney/.gmt/sessions/gmt6.9323/gmt_8.ps-' 2> '/Users/liamtoney/.gmt/sessions/gmt6.9323/psconvert_9323c.bb'] returned error 256.
System information
- Operating system: macOS Catalina 10.15.1
- Python installation (Anaconda, system, ETS): miniconda
- Version of GMT: 6.0.0
- Version of Python: 3.7.3
- Version of this package: 55af9b6
- If using conda, paste the output of
conda listbelow:
output of conda list
# packages in environment at /Users/liamtoney/miniconda3/envs/pygmt: # # Name Version Build Channel alabaster 0.7.12 py_0 conda-forge appdirs 1.4.3 py_1 conda-forge appnope 0.1.0 py37_1000 conda-forge asn1crypto 1.2.0 py37_0 conda-forge astroid 2.3.2 py37_0 conda-forge atomicwrites 1.3.0 py_0 conda-forge attrs 19.3.0 py_0 conda-forge babel 2.7.0 py_0 conda-forge backcall 0.1.0 py_0 conda-forge black 19.3b0 py_0 conda-forge bleach 3.1.0 py_0 conda-forge boost-cpp 1.70.0 h75728bb_2 conda-forge bzip2 1.0.8 h01d97ff_1 conda-forge ca-certificates 2019.9.11 hecc5488_0 conda-forge cairo 1.16.0 he1c11cd_1002 conda-forge certifi 2019.9.11 py37_0 conda-forge cffi 1.13.1 py37h33e799b_0 conda-forge cfitsio 3.470 h84d2f63_2 conda-forge cftime 1.0.4.2 py37h3b54f70_0 conda-forge chardet 3.0.4 py37_1003 conda-forge click 7.0 py_0 conda-forge coverage 4.5.4 py37h01d97ff_0 conda-forge cryptography 2.7 py37h212c5bf_0 conda-forge curl 7.65.3 h22ea746_0 conda-forge cycler 0.10.0 py_2 conda-forge dbus 1.13.6 h2f22bb5_0 conda-forge dcw-gmt 1.1.4 1001 conda-forge decorator 4.4.0 py_0 conda-forge defusedxml 0.6.0 py_0 conda-forge docutils 0.15.2 py37_0 conda-forge entrypoints 0.3 py37_1000 conda-forge expat 2.2.5 h4a8c4bd_1004 conda-forge ffmpeg 4.2 h5c2b479_0 conda-forge fftw 3.3.8 nompi_h9629793_1109 conda-forge flake8 3.7.8 py37_1 conda-forge fontconfig 2.13.1 h6b1039f_1001 conda-forge freetype 2.10.0 h24853df_1 conda-forge freexl 1.0.5 h1de35cc_1002 conda-forge fribidi 1.0.5 h01d97ff_1002 conda-forge gdal 3.0.1 py37h97c3584_10 conda-forge geos 3.7.2 h6de7cb9_2 conda-forge geotiff 1.5.1 h7e8e167_4 conda-forge gettext 0.19.8.1 h46ab8bc_1002 conda-forge ghostscript 9.22 h0a44026_1001 conda-forge giflib 5.1.7 h01d97ff_1 conda-forge glib 2.58.3 h9d45998_1002 conda-forge gmp 6.1.2 h0a44026_1000 conda-forge gmt 6.0.0 h5e3c8ef_0 conda-forge gnuplot 5.2.7 h14e7342_3 conda-forge gnutls 3.6.5 h53004b3_1002 conda-forge graphicsmagick 1.3.33 h04fbb9f_0 conda-forge graphite2 1.3.13 h2098e52_1000 conda-forge gshhg-gmt 2.3.7 1002 conda-forge harfbuzz 2.4.0 hd8d2a14_3 conda-forge hdf4 4.2.13 hf3c6af0_1002 conda-forge hdf5 1.10.5 nompi_h3e39495_1104 conda-forge icu 64.2 h6de7cb9_1 conda-forge idna 2.8 py37_1000 conda-forge imagesize 1.1.0 py_0 conda-forge importlib_metadata 0.23 py37_0 conda-forge ipykernel 5.1.3 py37h5ca1d4c_0 conda-forge ipython 7.8.0 py37h5ca1d4c_0 conda-forge ipython_genutils 0.2.0 py_1 conda-forge ipywidgets 7.5.1 py_0 conda-forge isort 4.3.21 py37_0 conda-forge jedi 0.15.1 py37_0 conda-forge jinja2 2.10.3 py_0 conda-forge jpeg 9c h1de35cc_1001 conda-forge json-c 0.13.1 h1de35cc_1001 conda-forge jsonschema 3.1.1 py37_0 conda-forge jupyter 1.0.0 py_2 conda-forge jupyter_client 5.3.3 py37_1 conda-forge jupyter_console 6.0.0 py_0 conda-forge jupyter_core 4.5.0 py_0 conda-forge kealib 1.4.10 h6659575_1005 conda-forge kiwisolver 1.1.0 py37h770b8ee_0 conda-forge krb5 1.16.3 hcfa6398_1001 conda-forge lame 3.100 h1de35cc_1001 conda-forge lazy-object-proxy 1.4.2 py37h01d97ff_0 conda-forge libblas 3.8.0 14_openblas conda-forge libcblas 3.8.0 14_openblas conda-forge libclang 8.0.1 h770b8ee_1 conda-forge libcurl 7.65.3 h16faf7d_0 conda-forge libcxx 9.0.0 h89e68fa_1 conda-forge libdap4 3.20.4 habf5908_0 conda-forge libedit 3.1.20170329 hcfe32e1_1001 conda-forge libffi 3.2.1 h6de7cb9_1006 conda-forge libgd 2.2.5 h5f83dcc_1006 conda-forge libgdal 3.0.1 h0158245_10 conda-forge libgfortran 4.0.0 2 conda-forge libiconv 1.15 h01d97ff_1005 conda-forge libkml 1.3.0 hed7d534_1010 conda-forge liblapack 3.8.0 14_openblas conda-forge libllvm8 8.0.1 h770b8ee_0 conda-forge libnetcdf 4.7.1 nompi_he14bcb6_101 conda-forge libopenblas 0.3.7 h4bb4525_2 conda-forge libpng 1.6.37 h2573ce8_0 conda-forge libpq 11.5 h756f0eb_1 conda-forge libsodium 1.0.17 h01d97ff_0 conda-forge libspatialite 4.3.0a hb0905fd_1031 conda-forge libssh2 1.8.2 hcdc9a53_2 conda-forge libtiff 4.0.10 hd08fb8f_1003 conda-forge libwebp 1.0.2 h14d73da_2 conda-forge libxcb 1.13 h1de35cc_1002 conda-forge libxml2 2.9.9 h12c6b28_5 conda-forge llvm-openmp 9.0.0 h40edb58_0 conda-forge lz4-c 1.8.3 h6de7cb9_1001 conda-forge markupsafe 1.1.1 py37h1de35cc_0 conda-forge matplotlib 3.1.1 py37_1 conda-forge matplotlib-base 3.1.1 py37h3a684a6_1 conda-forge mccabe 0.6.1 py_1 conda-forge mistune 0.8.4 py37h1de35cc_1000 conda-forge more-itertools 7.2.0 py_0 conda-forge nbconvert 5.6.0 py37_1 conda-forge nbformat 4.4.0 py_1 conda-forge nbsphinx 0.4.3 py_0 conda-forge ncurses 6.1 h0a44026_1002 conda-forge netcdf4 1.5.3 py37he9269ea_0 conda-forge nettle 3.4.1 h3efe00b_1002 conda-forge nose 1.3.7 py37_1002 conda-forge notebook 6.0.1 py37_0 conda-forge nspr 4.20 h0a44026_1000 conda-forge nss 3.47 hcec2283_0 conda-forge numpy 1.17.3 py37hde6bac1_0 conda-forge numpydoc 0.9.1 py_0 conda-forge olefile 0.46 py_0 conda-forge openh264 1.8.0 hd9629dc_1000 conda-forge openjpeg 2.3.1 hdc36067_1 conda-forge openssl 1.1.1c h01d97ff_0 conda-forge packaging 19.2 py_0 conda-forge pandas 0.25.2 py37h4f17bb1_0 conda-forge pandoc 2.7.3 0 conda-forge pandocfilters 1.4.2 py_1 conda-forge pango 1.42.4 h6691c8e_1 conda-forge parso 0.5.1 py_0 conda-forge pcre 8.43 h4a8c4bd_0 conda-forge pexpect 4.7.0 py37_0 conda-forge pickleshare 0.7.5 py37_1000 conda-forge pillow 6.2.1 py37hb6f49c9_0 conda-forge pip 19.3.1 py37_0 conda-forge pixman 0.38.0 h01d97ff_1003 conda-forge pluggy 0.13.0 py37_0 conda-forge poppler 0.67.0 hd5eb092_7 conda-forge poppler-data 0.4.9 1 conda-forge postgresql 11.5 h25afefd_1 conda-forge proj 6.2.0 hca663eb_1 conda-forge prometheus_client 0.7.1 py_0 conda-forge prompt_toolkit 2.0.10 py_0 conda-forge pthread-stubs 0.4 h1de35cc_1001 conda-forge ptyprocess 0.6.0 py_1001 conda-forge py 1.8.0 py_0 conda-forge pycodestyle 2.5.0 py_0 conda-forge pycparser 2.19 py37_1 conda-forge pyflakes 2.1.1 py_0 conda-forge pygments 2.4.2 py_0 conda-forge pylint 2.4.3 py37_0 conda-forge pyopenssl 19.0.0 py37_0 conda-forge pyparsing 2.4.2 py_0 conda-forge pyqt 5.12.3 py37h2a560b1_0 conda-forge pyqt5-sip 4.19.18 pypi_0 pypi pyqtwebengine 5.12.1 pypi_0 pypi pyrsistent 0.15.4 py37h01d97ff_0 conda-forge pysocks 1.7.1 py37_0 conda-forge pytest 5.2.1 py37_0 conda-forge pytest-cov 2.8.1 py_0 conda-forge pytest-mpl 0.10 py_0 conda-forge python 3.7.3 h93065d6_1 conda-forge python-dateutil 2.8.0 py_0 conda-forge pytz 2019.3 py_0 conda-forge pyzmq 18.1.0 py37hee98d25_0 conda-forge qt 5.12.5 h1b46049_0 conda-forge qtconsole 4.5.5 py_0 conda-forge readline 8.0 hcfe32e1_0 conda-forge requests 2.22.0 py37_1 conda-forge send2trash 1.5.0 py_0 conda-forge setuptools 41.4.0 py37_0 conda-forge six 1.12.0 py37_1000 conda-forge snowballstemmer 2.0.0 py_0 conda-forge sphinx 1.8.5 py37_0 conda-forge sphinx-gallery 0.4.0 py37_0 conda-forge sphinx_rtd_theme 0.4.3 py_0 conda-forge sphinxcontrib-websupport 1.1.2 py_0 conda-forge sqlite 3.30.1 h93121df_0 conda-forge tbb 2018.0.5 h2d50403_0 conda-forge terminado 0.8.2 py37_0 conda-forge testpath 0.4.2 py_1001 conda-forge tiledb 1.6.2 h4f44bfb_1 conda-forge tk 8.6.9 h2573ce8_1003 conda-forge toml 0.10.0 py_0 conda-forge tornado 6.0.3 py37h01d97ff_0 conda-forge traitlets 4.3.3 py37_0 conda-forge tzcode 2019a h01d97ff_1002 conda-forge urllib3 1.25.6 py37_0 conda-forge wcwidth 0.1.7 py_1 conda-forge webencodings 0.5.1 py_1 conda-forge wheel 0.33.6 py37_0 conda-forge widgetsnbextension 3.5.1 py37_0 conda-forge wrapt 1.11.2 py37h01d97ff_0 conda-forge x264 1!152.20180806 h1de35cc_0 conda-forge xarray 0.14.0 py_0 conda-forge xerces-c 3.2.2 hbda6038_1004 conda-forge xorg-kbproto 1.0.7 h1de35cc_1002 conda-forge xorg-libice 1.0.10 h01d97ff_0 conda-forge xorg-libsm 1.2.3 h01d97ff_1000 conda-forge xorg-libx11 1.6.9 h0b31af3_0 conda-forge xorg-libxau 1.0.9 h1de35cc_0 conda-forge xorg-libxdmcp 1.1.3 h01d97ff_0 conda-forge xorg-libxext 1.3.4 h01d97ff_0 conda-forge xorg-xextproto 7.3.0 h1de35cc_1002 conda-forge xorg-xproto 7.0.31 h1de35cc_1007 conda-forge xz 5.2.4 h1de35cc_1001 conda-forge zeromq 4.3.2 h6de7cb9_2 conda-forge zipp 0.6.0 py_0 conda-forge zlib 1.2.11 h0b31af3_1006 conda-forge zstd 1.4.0 ha9f0a20_0 conda-forge