nf-star-build-index

Build an indexed genome for use with the STAR aligner

Parameters

fasta: Path to the FASTA file to use
gtf: Path to the GTF file to user
outdir: Folder to place the generated index files
sjdbOverhang: Length of the donor/acceptor sequence on each side of the junctions, ideally (mate.ength - 1). Default: 100

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LICENSE		LICENSE
README.md		README.md
main.nf		main.nf
nextflow.config		nextflow.config