It would be beneficial to include a feature that allows tile stitching in our preprocessing pipeline. This functionality would enable the merger of multiple smaller TIFF images ("tiles") into a single large, pyramidal OME-TIFF.
Solution:
Porting the existing QuPath groovy script to python.
source:
https://gist.github.com/petebankhead/b5a86caa333de1fdcff6bdee72a20abe