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Initial docs for running AM3.

Fixes #993

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@bschroeter bschroeter requested a review from ccarouge August 27, 2025 00:09
@bschroeter bschroeter linked an issue Aug 27, 2025 that may be closed by this pull request
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@ccarouge ccarouge moved this to In Progress in ACCESS-AM3 Aug 29, 2025

If you are unsure whether {{ model }} is the right choice for your experiment, take a look at the overview of [ACCESS Models](/models).

[{{ model }} release notes]({{release_notes}}) are available on the ACCESS-Hive Forum and are updated when new releases are made available.
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Remove for now because the release notes will only be present from the beta release.


Before running {{ model }}, you need to [Set Up your NCI Account](/getting_started/set_up_nci_account).

### MOSRS Account
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Should we say something that this step is also a licence requirement to use the UM model @heidinett ?
That's a comment that's for more than AM3 and for all the ACCESS models (except OM) I guess.

Join the following projects by requesting membership on their respective NCI project pages:

- [access](https://my.nci.org.au/mancini/project/access/join)
- [hh5](https://my.nci.org.au/mancini/project/hh5/join)
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We don't want to require this. Need to check the config.

- [hr22](https://my.nci.org.au/mancini/project/hr22/join)
- [ki32](https://my.nci.org.au/mancini/project/ki32/join)
- [ki32_mosrs](https://my.nci.org.au/mancini/project/ki32_mosrs/join)
- [rp23](https://my.nci.org.au/mancini/project/rp23/join)
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We don't want to require this. Need to check if we can change the suite to use the default user's project instead of rp23.

- [hh5](https://my.nci.org.au/mancini/project/hh5/join)
- [hr22](https://my.nci.org.au/mancini/project/hr22/join)
- [ki32](https://my.nci.org.au/mancini/project/ki32/join)
- [ki32_mosrs](https://my.nci.org.au/mancini/project/ki32_mosrs/join)
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Is this changing with the new licence agreement @heidinett @aidanheerdegen ? Sorry, I forgot.

If yes, when does it change?


### Connection to an ARE VDI Desktop (optional)

This documentation has been written from the perspective of running the model over an SSH connection run from a local terminal, however, the commands are transferable to a terminal session within an ARE session.
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I don't find this very clear whether someone should use ARE or not. Is it because it does not matter as long as they have access to a terminal?

ssh -Y [email protected]
```

### Set up a Persistent Session
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Need to review this section. It's not for beginners. Need to separate: start a new persistent session and using existing session and cleaning stale sessions.

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CM2 documentation for persistent sessions is structured differently.

What is the criteria to know what should be in the How to Run and what should be in a separate page on ACCESS-Hive?


For further instructions on getting the _Rose/Cylc_ setup, refer to the [Detailed guide](#rosecylcmosrs-setup).

### MOSRS authentication
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How often do people need to do that? Recommended to do every time? There is a tip for ACCESS-CM2 documentation that isn't reproduced here.


### Running the suite

To run the suite in it's default configuration, run the following commands:
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Suggested change
To run the suite in it's default configuration, run the following commands:
To run the suite in its default configuration, run the following commands:

Comment on lines +101 to +102
!!! tip
{{ model }} will automatically select the appropriate persistent session.
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This is different from CM or rAM3 instructions. I'm wondering if we are missing the section to register the persistent session as a target for cylc

!!! warning
This will overwrite all existing model output and logs for the same suite.

### Reload the suite
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I wouldn't use this title since "Reload" is explained later. Why not: "Soft restart with changes" ?

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And I would place it before just after the soft restart option.

Currently uses one of the other model logos as a placeholder on the top level navigation page
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Initial documentation package for ACCESS-AM3

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