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Fix FreeBSD on CirrusCI samtools issue
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.cirrus.yml

Lines changed: 4 additions & 6 deletions
Original file line numberDiff line numberDiff line change
@@ -4,11 +4,9 @@ freebsd_instance:
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task:
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env:
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CIRRUS_CLONE_SUBMODULES: true
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install_script: pkg install -y cmake git
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script: |
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mkdir build
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cd build
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install_script: pkg install -y cmake git samtools
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compile_script: |
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mkdir build && cd build
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cmake -DCMAKE_BUILD_TYPE=Release -DHAVE_TESTS=1 -DENABLE_WERROR=1 -DHAVE_SSE4_1=1 ..
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make -j $(sysctl -n hw.ncpu)
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cd ..
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./util/regression/run_regression.sh ./build/src/mmseqs SCRATCH
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test_script: ./util/regression/run_regression.sh ./build/src/mmseqs SCRATCH

util/regression

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