Fix warning in pairaln

martin-steinegger · martin-steinegger · commit 390457d87ed7 · 2023-05-28T12:21:15.000+09:00
diff --git a/src/util/pairaln.cpp b/src/util/pairaln.cpp
@@ -102,7 +102,7 @@ int pairaln(int argc, const char **argv, const Command& command) {
             // fill taxonToPair vector
             std::unordered_map<unsigned int, size_t>::iterator it;
             for (it = findPair.begin(); it != findPair.end(); ++it) {
-                int thresholdToPair = (par.pairmode == Parameters::PAIRALN_MODE_ALL_PER_SPECIES) ? 1 : fileToIds[fileNumber].size() - 1;
+                size_t thresholdToPair = (par.pairmode == Parameters::PAIRALN_MODE_ALL_PER_SPECIES) ? 1 : fileToIds[fileNumber].size() - 1;
                 if (it->second > thresholdToPair) {
                     taxonToPair.emplace_back(it->first);
                 }

Original file line number	Diff line number	Diff line change
`@@ -102,7 +102,7 @@ int pairaln(int argc, const char **argv, const Command& command) {`
`102`	`102`	`// fill taxonToPair vector`
`103`	`103`	`std::unordered_map<unsigned int, size_t>::iterator it;`
`104`	`104`	`for (it = findPair.begin(); it != findPair.end(); ++it) {`
`105`		`- int thresholdToPair = (par.pairmode == Parameters::PAIRALN_MODE_ALL_PER_SPECIES) ? 1 : fileToIds[fileNumber].size() - 1;`
	`105`	`+ size_t thresholdToPair = (par.pairmode == Parameters::PAIRALN_MODE_ALL_PER_SPECIES) ? 1 : fileToIds[fileNumber].size() - 1;`
`106`	`106`	`if (it->second > thresholdToPair) {`
`107`	`107`	`taxonToPair.emplace_back(it->first);`
`108`	`108`	`}`