List view

Add 3dDespike step

effort: highEstimated high effort taskEstimated high effort task

feature

impact: lowEstimated low impact taskEstimated low impact task

potential hackathon project

Status: Open.

#699 In nipreps/fmriprep;

· chrisgorgo opened on Sep 12, 2017

Add full API to documentation

documentation

help wanted

Status: Open.

#615 In nipreps/fmriprep;

· effigies opened on Jul 27, 2017

Slider view pre/post of carpetplot

confounds

potential hackathon project

Status: Open.

#1120 In nipreps/fmriprep;

· oesteban opened on May 9, 2018

Add info about available disk space in the work dir

error reporting

Status: Open.

#1406 In nipreps/fmriprep;

· chrisgorgo opened on Nov 20, 2018

Compute MRIQC's metrics

effort: highEstimated high effort taskEstimated high effort task

impact: mediumEstimated medium impact taskEstimated medium impact task

Status: Open.

#1241 In nipreps/fmriprep;

· oesteban opened on Aug 10, 2018

Plot BOLD standard deviation before and after preprocessing

effort: mediumEstimated medium effort taskEstimated medium effort task

impact: highEstimated high impact taskEstimated high impact task

reports

Status: Open.

#1541 In nipreps/fmriprep;

· oesteban opened on Mar 13, 2019

Reports generator takes echoes for full runs

bug

effort: mediumEstimated medium effort taskEstimated medium effort task

impact: mediumEstimated medium impact taskEstimated medium impact task

me-epi

multiecho

reports

Status: Open.

#1598 In nipreps/fmriprep;

· oesteban opened on Apr 30, 2019

Map fsLR (space-fsaverage) surfaces to BOLD

effort: mediumEstimated medium effort taskEstimated medium effort task

feature

impact: highEstimated high impact taskEstimated high impact task

Status: Open.

#1611 In nipreps/fmriprep;

· oesteban opened on May 5, 2019

Reports: "get zip file" button

effort: mediumEstimated medium effort taskEstimated medium effort task

impact: highEstimated high impact taskEstimated high impact task

reports

Status: Open.

#1698 In nipreps/fmriprep;

· oesteban opened on Jul 10, 2019

Write HOWTO read an fMRIPrep report

documentation

effort: highEstimated high effort taskEstimated high effort task

impact: highEstimated high impact taskEstimated high impact task

Status: Open.

#1831 In nipreps/fmriprep;

· oesteban opened on Oct 16, 2019

FR: Arbitrary output resolution (for <code>--output-spaces</code>)

derivatives

effort: mediumEstimated medium effort taskEstimated medium effort task

feature

impact: mediumEstimated medium impact taskEstimated medium impact task

Status: Open.

#1968 In nipreps/fmriprep;

· oesteban opened on Feb 7, 2020

Group reports

group-level

Status: Open.

#2042 In nipreps/fmriprep;

· oesteban opened on Mar 19, 2020

save the transformation matrices during the call to mcflirt

effort: lowEstimated low effort taskEstimated low effort task

impact: mediumEstimated medium impact taskEstimated medium impact task

Status: Open.

#1637 In nipreps/fmriprep;

· jcrdubois opened on May 15, 2019

fmriprep-docker: mount volumes as delegated

container

effort: lowEstimated low effort taskEstimated low effort task

impact: lowEstimated low impact taskEstimated low impact task

Status: Open.

#1582 In nipreps/fmriprep;

· oesteban opened on Apr 16, 2019

Very short TE EPIs are challenging for BBR

coregistration

ds000148

effort: mediumEstimated medium effort taskEstimated medium effort task

impact: lowEstimated low impact taskEstimated low impact task

Status: Open.

#997 In nipreps/fmriprep;

· oesteban opened on Feb 20, 2018

Sentry: Add commit info for more targeted feedback

error reporting

Status: Open.

#1107 In nipreps/fmriprep;

· effigies opened on May 4, 2018

Save logs

effort: lowEstimated low effort taskEstimated low effort task

impact: mediumEstimated medium impact taskEstimated medium impact task

UX

Status: Open.

#1265 In nipreps/fmriprep;

· effigies opened on Aug 29, 2018

Revise SBRef handling

coregistration

effort: mediumEstimated medium effort taskEstimated medium effort task

help wanted

impact: highEstimated high impact taskEstimated high impact task

multiband (MB) & SBRefs

Status: Open.

#1511 In nipreps/fmriprep;

· oesteban opened on Feb 15, 2019

Explain what are the highpass filter parameters

documentation

help wanted

Status: Open.

#1521 In nipreps/fmriprep;

· chrisgorgo opened on Feb 28, 2019

Replace <code>mcflirt</code> with <code>3dVolreg</code>

effort: mediumEstimated medium effort taskEstimated medium effort task

feature

impact: highEstimated high impact taskEstimated high impact task

Status: Open.

#1535 In nipreps/fmriprep;

· chrisgorgo opened on Mar 12, 2019

Sentry is attempting to send 1 pending error messages

effort: mediumEstimated medium effort taskEstimated medium effort task

impact: highEstimated high impact taskEstimated high impact task

UX

Status: Open.

#1544 In nipreps/fmriprep;

· oesteban opened on Mar 15, 2019

Sentinel interface to check environment versions

effort: mediumEstimated medium effort taskEstimated medium effort task

impact: mediumEstimated medium impact taskEstimated medium impact task

Status: Open.

#1576 In nipreps/fmriprep;

· oesteban opened on Apr 8, 2019

SyN-SDC fails for non-default template spaces

fieldmaps

SyN-SDC

templates

Status: Open.

#1665 In nipreps/fmriprep;

· effigies opened on May 31, 2019

Send errors to stderr more consistently

UX

Status: Open.

#1781 In nipreps/fmriprep;

· dmd opened on Sep 17, 2019

Visual reports: Reviewer Mode

effort: mediumEstimated medium effort taskEstimated medium effort task

impact: highEstimated high impact taskEstimated high impact task

reports

Status: Open.

#1910 In nipreps/fmriprep;

· oesteban opened on Dec 10, 2019