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lines changed Original file line number Diff line number Diff line change @@ -106,6 +106,7 @@ sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_boldref.json
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sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_boldref.nii.gz
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sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_desc-brain_mask.json
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sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_desc-brain_mask.nii.gz
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+ sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_desc-goodvoxels_mask.nii.gz
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sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_desc-preproc_bold.json
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sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_desc-preproc_bold.nii.gz
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sub-01.html
Original file line number Diff line number Diff line change @@ -128,6 +128,7 @@ sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_boldref.json
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sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_boldref.nii.gz
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sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_desc-brain_mask.json
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sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_desc-brain_mask.nii.gz
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+ sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_desc-goodvoxels_mask.nii.gz
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sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_desc-preproc_bold.json
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sub-01/func/sub-01_task-mixedgamblestask_run-02_space-T1w_desc-preproc_bold.nii.gz
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sub-01.html
Original file line number Diff line number Diff line change @@ -572,6 +572,25 @@ def init_bold_wf(
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(bold_anat_wf , goodvoxels_bold_mask_wf , [
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('outputnode.bold_file' , 'inputnode.bold_file' ),
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]),
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+ ]) # fmt:skip
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+
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+ ds_goodvoxels_mask = pe .Node (
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+ DerivativesDataSink (
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+ base_directory = fmriprep_dir ,
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+ dismiss_entities = dismiss_echo (),
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+ compress = True ,
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+ space = 'T1w' ,
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+ desc = 'goodvoxels' ,
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+ suffix = 'mask' ,
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+ ),
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+ name = 'ds_goodvoxels_mask' ,
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+ run_without_submitting = True ,
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+ )
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+ ds_goodvoxels_mask .inputs .source_file = bold_file
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+ workflow .connect ([
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+ (goodvoxels_bold_mask_wf , ds_goodvoxels_mask , [
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+ ('outputnode.goodvoxels_mask' , 'in_file' ),
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+ ]),
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(goodvoxels_bold_mask_wf , bold_fsLR_resampling_wf , [
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('outputnode.goodvoxels_mask' , 'inputnode.volume_roi' ),
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]),
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