Trouble running nextflow with SGE #5249
Unanswered
tanyasarkjain
asked this question in
Q&A
Replies: 0 comments
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Uh oh!
There was an error while loading. Please reload this page.
-
Im trying to run a .nf script on my SGE cluster. I've created a folder with the bin folder that contains the nextflow executable, and added the path to my bashrc file . running the executable directly works fine, but when creating a config file in the directory with my script, and setting executor = 'sge' in the file, im finding the job won't run - gets stuck on
Beta Was this translation helpful? Give feedback.
All reactions