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This milestone aims to make the Example Data repo easier to navigate and use by better organizing its content, including multiple README and index files to help users find the example they need, and more finely divided documentation so that specific questions can be tracked down and answered easily.
Overdue by 3 year(s)•Due by December 17, 2021•0/2 issues closedIssues to be tackled at some point in the future, but outside the scope of current work.
No due date•0/3 issues closedOne of our project goals is to develop a method for maintaining provenance of metadata transformations. This milestone covers developing a method for recording this provenance information, how it is to be recorded, and (potentially) how it can be reused in other workflows. (Related to https://github.com/cancerDHC/operations/issues/21)
Overdue by 3 year(s)•Due by March 31, 2022•0/1 issues closedThis milestone covers our goal of demonstrating harmonization of multiple CRDCH entities, e.g. Specimen, Diagnosis, CancerStageObservationSet and so on.
Overdue by 3 year(s)•Due by December 17, 2021•1/3 issues closedThis milestone tracks our goal of demonstrating harmonization from multiple nodes: probably starting with GDC and PDC, and then expanding to include other nodes.
Overdue by 3 year(s)•Due by December 17, 2021•0/2 issues closedThe current Example Data workflow consists of scripts and Jupyter Notebooks that use a mix of CRDCH v1.1 and the CRDCH v1.0.1 releases. This milestone should standardize everything to use the latest release, as imported from PyPI.
Overdue by 3 year(s)•Due by December 17, 2021•3/9 issues closed