remove local link; new config

Author: CamDavidsonPilon

workspace/scripts/04-install-services.sh

@@ -28,10 +28,6 @@ sudo cp /files/system/systemd/local_access_point.service $SYSTEMD_DIR
 cp /files/bash/local_access_point.sh /usr/local/bin/local_access_point.sh
 sudo systemctl enable local_access_point.service
 
-# install optional local link service, both workers and leaders can do this.
-sudo cp /files/system/systemd/local_link.service $SYSTEMD_DIR
-cp /files/bash/local_link.sh /usr/local/bin/local_link.sh
-sudo systemctl enable local_link.service
 
 # systemd: needed for setting up dirs in /tmp and sqlite dbs
 sudo cp /files/system/systemd/create_diskcache.service $SYSTEMD_DIR

workspace/scripts/06-install-pioreactor.sh

@@ -17,6 +17,7 @@ sudo apt-get install -y git
 
 sudo -u $USERNAME mkdir -p $PIO_DIR
 sudo -u $USERNAME mkdir -p $PIO_DIR/storage
+sudo -u $USERNAME mkdir -p $PIO_DIR/models
 sudo -u $USERNAME mkdir -p $PIO_DIR/plugins
 sudo -u $USERNAME mkdir -p $PIO_DIR/plugins/ui/contrib/jobs
 sudo -u $USERNAME mkdir -p $PIO_DIR/plugins/ui/contrib/automations/{dosing,led,temperature}

workspace/scripts/15-install-openocd.sh

@@ -25,7 +25,7 @@ if [ "$WORKER" == "1" ]; then
 
     # move config
     mkdir /usr/local/share/openocd/
-    cp -r /files/system/openocd/scripts   /usr/local/share/openocd/
+    cp -r /files/system/openocd/scripts  /usr/local/share/openocd/
 
     # pull latest .elf image
     wget -O /usr/local/bin/main.elf https://github.com/pioreactor/pico-build/releases/latest/download/main.elf

workspace/scripts/files/bash/local_link.sh

@@ -63,8 +63,8 @@ duration_between_led_off_and_od_reading=0.125
 
 [bioreactor]
 # used in dosing automations
-# max_volume_ml is determined by the volume that just touches the outflow tube. I.e. if you
-# where to keep running the waste pump, what would the stable volume be.
+# max_working_volume_ml is determined by the volume that just touches the outflow tube. I.e. if you
+# where to keep running the waste pump, what would the stable volume be. This can be changed in the UI.
 # see docs: https://docs.pioreactor.com/user-guide/prepare-vial-for-cultures#extra
 max_working_volume_ml=14
 initial_volume_ml=14

workspace/scripts/files/pioreactor/config.example.ini

@@ -3,6 +3,7 @@ url.rewrite-once = (
  "^(/static($|/.*))$" => "$1",
  "^(/api/.*)$" => "/main.fcgi$1",
  "^(/unit_api/.*)$" => "/main.fcgi$1",
+ "^(/mcp/.*)$" => "/main.fcgi$1",
 )
 alias.url += (
   "/static/" => "/var/www/pioreactorui/static/"

workspace/scripts/files/system/lighttpd/50-pioreactorui.conf

@@ -1,7 +1,7 @@
 [Unit]
 Description=Publish an alias for %H.local via mdns
 Wants=network-online.target
-After=network-online.target firstboot.service local_access_point.service local_link.service avahi-daemon.service
+After=network-online.target firstboot.service local_access_point.service avahi-daemon.service
 
 [Service]
 User=pioreactor